Gene RPC_2118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_2118 
Symbol 
ID3973327 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2317980 
End bp2318573 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content65% 
IMG OID637925226 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_531991 
Protein GI90423621 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.109403 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTGGC TGCAACCGAT CACGCTCAGC GGCCCGCACG CCACGCTGGA GCCCTTGGCG 
CCCGCGCATC GCGACGGGCT GATCACGGCG GTTCAGGACG GCGAGTTGTG GAAGCTGTGG
TACACGTTGA TTCCCGCGCC GGAGGCGATG GAGGCCGAGA TCGCCCGCCG GCTGGCGCTG
CACAGCACTG GCGCGATGCT GCCCTTCACC GTCAAGGACG GCCAGGGCGC GATCGCCGGC
ATGACCAGCT ATATGCACGT CGACGCTGCC AATCGCCGGG TCGAGATCGG CTCGACCTGG
TACGCCAGGC GGGTGCAACG CAGCGGCGTC AACACCCAAT GCAAACTCTT GCTGCTCGCC
CATGCTTTCG AGGCAATGGG TTGCATCGCG GTCGAGTTTC GTACGCATTT CTTCAACCAC
GCGTCGCGAC GCGGGATCGA ACGACTTGGT GCCAAGCAGG ACGGTATCCT GCGCAGTCAT
CAGCTCGCGC CCAACGGGAC GCTGCGTGAC ACCGTGGTCT ACAGCATCGT CGCCGCCGAA
TGGCCGACGG TGAAGGCGCA CCTCGACTTT CAACTCAATG GCCGGTTGCG CTAG
 
Protein sequence
MPWLQPITLS GPHATLEPLA PAHRDGLITA VQDGELWKLW YTLIPAPEAM EAEIARRLAL 
HSTGAMLPFT VKDGQGAIAG MTSYMHVDAA NRRVEIGSTW YARRVQRSGV NTQCKLLLLA
HAFEAMGCIA VEFRTHFFNH ASRRGIERLG AKQDGILRSH QLAPNGTLRD TVVYSIVAAE
WPTVKAHLDF QLNGRLR