| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2099 |
|---|
| Symbol | |
|---|
| ID | 3973655 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | - |
|---|
| Start bp | 2299158 |
|---|
| End bp | 2300312 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637925207 |
|---|
| Product | 8-amino-7-oxononanoate synthase |
|---|
| Protein accession | YP_531972 |
|---|
| Protein GI | 90423602 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0156] 7-keto-8-aminopelargonate synthetase and related enzymes |
|---|
| TIGRFAM ID | [TIGR00858] 8-amino-7-oxononanoate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.851935 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.502362 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCCAG CACCGAACAA CAAGCTGTTC CGCTATGCGG AGGCATTGCA GACATTGAAC
GACGACGGCC GGCTGCGGCT GCTGAAGCCG CGTAGCGGCA TCGATTTCGT CTCCAACGAT
TATCTGGCCT TGGCCAACGC GCCGCAGATC AGAGACGCGG TGATCGCCGC GCTGGAAGCC
GGCACCCCGA TCGGCTCCGG CGGCTCGCGC AGCCTGCGCG GCAATTGCGC CGAACATGAG
CGCCTCGAAA GCTACGCCGC GCAGTTTTTC GGCGCCGACG CCGCGCTGTT TTTCGCCGCC
GGCTATGTGG CGAATTTCGC CGTGCTGACC ACGCTGCCGC AGCGCGGCGA TCTTTTGGTG
CTGGATACGC TGGTCCACGC CAGCATTCAC GAGGGCGCCA GAGCCGGCCG CGCCGAGCAT
CGCGATGGCG GCCACAACGA CGCCCAGGCG ATGGACGACA CCATCAAGAC CTGGCGCGCC
GAGGGCGGCA CCGGCCGGGT CTGGCTCGTG GTCGAAAGCC TGTACAGCAT GGACGGCGAT
TTCGCGCCGC TCGAGCAACT GATCGCGCTG GCCGAGCGAC ACGACGCCTT CCTGATGGTC
GACGAGGCCC ATGCCACCGG GATCTATGGC CCGCAGGGCC GCGGCCTCAC CGCGCCGTTC
GAGGGCCGCG AGAATCTGAT CGTCATCCAC ACCTGCGGCA AGGCGCTCGG CGCCGCCGGC
GCGCTGGTCA CCATGACGCG GGTGTTGCGC GATTTCATGG TCAATCGCTG CCGGCCGTTC
ATCTTTTCCA CCGCGCCGTC GCCATTGGTC GCGTTGGCGG TGCAGCAGGC GCTGATGCTG
TTGCACGACG AGCCGGAACG GCCACAGCGG CTGCTCGATC TGATCCAGTT CACCCATCGC
GAATTCGAAG CCCGCTTCGG GCGAAGGCTG TCGAACTCGC AGATTCTGCC CTATATCGTC
GGCGACAACG CGCGGGCGAT GACGCTCGCC GCGGCGATGC AGGCGCGCGG CTTCGACATC
CGCGGGATCC GGCCGCCGAC GGTGCCGGCC GGCACCGCGC GGCTGCGGAT TTCGTTGACG
CTGAACGTCG GCGAGGCCGA AGTGCTGGCG ATGCTCGATG CGCTCGACGA AGAGACCAAG
GGGGCCGCGC GATGA
|
|---|
| Protein sequence | MTPAPNNKLF RYAEALQTLN DDGRLRLLKP RSGIDFVSND YLALANAPQI RDAVIAALEA
GTPIGSGGSR SLRGNCAEHE RLESYAAQFF GADAALFFAA GYVANFAVLT TLPQRGDLLV
LDTLVHASIH EGARAGRAEH RDGGHNDAQA MDDTIKTWRA EGGTGRVWLV VESLYSMDGD
FAPLEQLIAL AERHDAFLMV DEAHATGIYG PQGRGLTAPF EGRENLIVIH TCGKALGAAG
ALVTMTRVLR DFMVNRCRPF IFSTAPSPLV ALAVQQALML LHDEPERPQR LLDLIQFTHR
EFEARFGRRL SNSQILPYIV GDNARAMTLA AAMQARGFDI RGIRPPTVPA GTARLRISLT
LNVGEAEVLA MLDALDEETK GAAR
|
|---|
| |