| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2089 |
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| Symbol | |
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| ID | 3971854 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 2286100 |
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| End bp | 2287698 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637925197 |
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| Product | putative alpha-isopropylmalate/homocitrate synthase family transferase |
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| Protein accession | YP_531962 |
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| Protein GI | 90423592 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00977] 2-isopropylmalate synthase/homocitrate synthase family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.657625 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGCG AACGCCTCTA TCTGTTCGAT ACCACGCTGC GCGACGGCGC GCAGACCAAC
GGCGTCGATT TCACCCTGCA CGACAAGCGG CTGATCGCCG CGATGCTCGA CGATCTCGGC
ATCGATTACG TCGAGGGTGG CTATCCGGGC GCCAATCCGA GCGACACCGA GTTTTTCGCG
ACCGATCCGG CCCTGAAATC CGCGACCTTC ACCGCCTTCG GCATGACGCG GCGGCCCGGC
CGTTCGGCGT CCAACGATCC CGGCATCGCG GCGCTGCTCG AAGCCAAGGC CGACGCGATC
TGCTTCGTGG CAAAGTCCTC GGCCTATCAG GTCCGCGTCG CGCTCGGCAC CACCAACGAG
GAAAACCTCG CCTCGATCCG CGACAGCGTC GGCGCCGCCA AGGCCCGTGG CCGCGAGGTG
CTGGTCGATT GCGAACACTT CTTCGATGGT TACAAAGAGG ATCCGCAATT CGCGCTGTCC
TGCGCCAAGG CCGCCTATGA CGCCGGCGCG CGCTGGGTGG TGTTGTGCGA CACCAATGGC
GGCACCATGC CGCACGAGAT CGAGGCGATC GTCGGCCAAG TGGTCAAACA GATCCCCGGC
AGCCATGTCG GCATCCACGC CCATAACGAC ACCGAGCAGG CGGTGGCCTG TTCGCTGGCC
GCGGTGCGCG CCGGCGCGCG GCAGATCCAG GGCACCTTGA ACGGGCTCGG CGAGCGCTGC
GGCAACGCCA ATCTGTGCTC GATGATCCCG ACCTTGAAGC TGAAGCCGGA ATTCGCCGAG
GCCTTCGACA TCGGGGTGTC GGAGGACAAA CTCGCCACGC TGGTGCAGGT GTCGCGCGCG
CTCGACAATA TCCTCAATCG TCCGAGCAAT CCGCACGCGG CTTATGTCGG CGGCAGCGCC
TTCGTCACCA AGACCGGGAT CCACGCCTCG GCGGTGATGA AGGATCCGCA CACTTATGAG
CACGTTTCGC CCGAGACCGT CGGCAATCAC CGCAAGGTGC TGGTGTCCGA TCAGGCCGGC
CGCTCCAACG TGCTGGCGGC GCTGTCGCGC ACCACCATTC CGTTCGACAA GGACGATCCG
AAGCTGAACC GCTTGGTCGA GGAATTGAAG GAGCGCGAGG CCGCCGGCTA TGCCTATGAA
TCCGCCAACG CCTCGTTCGA TCTGTTGGCG CGGCGCACGC TGGGCAAGGT GCCGGAGTTT
TTCCGGGTCG AGCAGTTCGA CGTCAATGTC GAGCAGCGCT ACAATTCGCA CGGCAATCGC
GTCACCATGG CGATGGCGGT GGTCAAGGTG AATGTCGACG GCGAGGTGCT GATCTCGGCC
GCCGACGGCA ACGGCCCGGT CAACGCGCTC GATGTTGCGC TGCGCAAGGA CCTCGGCAAG
TTCCAGAAGT ACATCGAGAA CCTCAAGCTG ATCGATTACC GCGTCCGTAT CCTCAATGGC
GGAACCGAGG CGGTGACCCG GGTGCTGATC GAGAGCGAGG ACGAGCAGGG CGAACGCTGG
ACCACCATCG GGGTGTCGCC GAATATCATC GACGCCTCGT TCCAGGCGCT GATGGATTCG
GTGGTCTACA AGCTGGTGAA GTGCAACGCC CAGGCGTGA
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| Protein sequence | MSRERLYLFD TTLRDGAQTN GVDFTLHDKR LIAAMLDDLG IDYVEGGYPG ANPSDTEFFA
TDPALKSATF TAFGMTRRPG RSASNDPGIA ALLEAKADAI CFVAKSSAYQ VRVALGTTNE
ENLASIRDSV GAAKARGREV LVDCEHFFDG YKEDPQFALS CAKAAYDAGA RWVVLCDTNG
GTMPHEIEAI VGQVVKQIPG SHVGIHAHND TEQAVACSLA AVRAGARQIQ GTLNGLGERC
GNANLCSMIP TLKLKPEFAE AFDIGVSEDK LATLVQVSRA LDNILNRPSN PHAAYVGGSA
FVTKTGIHAS AVMKDPHTYE HVSPETVGNH RKVLVSDQAG RSNVLAALSR TTIPFDKDDP
KLNRLVEELK EREAAGYAYE SANASFDLLA RRTLGKVPEF FRVEQFDVNV EQRYNSHGNR
VTMAMAVVKV NVDGEVLISA ADGNGPVNAL DVALRKDLGK FQKYIENLKL IDYRVRILNG
GTEAVTRVLI ESEDEQGERW TTIGVSPNII DASFQALMDS VVYKLVKCNA QA
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