| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2082 |
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| Symbol | nadE |
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| ID | 3971847 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 2278744 |
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| End bp | 2280507 |
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| Gene Length | 1764 bp |
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| Protein Length | 587 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637925190 |
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| Product | NAD synthetase |
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| Protein accession | YP_531955 |
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| Protein GI | 90423585 |
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| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0171] NAD synthase
[COG0388] Predicted amidohydrolase |
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| TIGRFAM ID | [TIGR00552] NAD+ synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.685208 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.304866 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTTTCA TGACCGAACA AGCTGACTTC AAGATCACGC TGGCGCAATT GAACCCGACG
GTCGGCGATA TCGCCGGCAA CGCCGGCCTG GCCCGCGCGG CGCGGGCGAG GGCGGCCGCA
GACGGCGCCC AGTTGATCGT ATTTCCCGAG CTGTTCATCT CCGGCTATCC GCCGGAGGAT
TTGGTGTTGA AGCCGGCATT CCAGGCGGCC TGCCGCGCCG CGGTCGAGGA CCTGGCGCGC
GACACCGCCG ATGGCGGCCC CGCGATGCTG GTCGGCTCGC CTTGGGTCGA CGGCGGCAAG
CTGTACAACG CCTGCGCGCT GCTCGACGCA GGCGCGATCG CCGCGATCCG CTTCAAGGTC
AATCTGCCGA ATTACGGCGT GTTCGATGAA AAGCGGGTGT TTTGCCGCGG CCCGGTGTCC
GGGCCGGTGA CGATCCGCGG CGTCCGCGTC GGCGTGCCGA TCTGCGAAGA CACCTGGATG
GAGGAATCCG CCGACTACGA GAACGTGGTC GAGTGCCTGG CCGAGACCGG CGCCGAAATC
CTGATCGTGC CGAACGGCTC GCCTTACGCC CGCGGCAAGG CCGATCTGCG GCTGTCGGTG
CAGGTGGCGC GGGTCACCGA GAGCGATCTG CCGCTGATCT ATGTCAATCA GGTCGGCGGC
CAGGACGAAT TGGTGTTCGA CGGCGCCTCG TTCGCGCTGA ACGCCGATCG CACGCTGGCG
GCGCAATTGC CGGCGTTCGA ACAAAGCCTC ACCACGCTGC GCTGGGTCAA CGGCGATTCC
GGCTGGCGCT GCGACGGCGC GATCGCGCCG GTGATCGAGG ACGACGAGGC CGATTACGCC
GCCTGCGTGC TGGGCCTGCG CGACTACGTC AACAAGAACG GCTTTCCCGG CGTGCTGCTC
GGCATTTCCG GCGGCATCGA TTCCGCGCTG TGCGCGGCGA TCGCGGTCGA CGCGCTGGGG
GTGGAGCGGG TGCGCGGCGT GATGCTGCCG TTCCGCTTCA CCGCGCAGGT CTCGCTCGAC
GACGCGGCGA AACTCGCGGG CGCGCTCGGA TTTAAGTACG AAGTGCTGCC GATCGCCCAA
GCGGTCAACG GCTTCGAGGA GATTCTCGCC GGCACCTTCA GGGGCCTGCC GCGCGACATC
ACCGAAGAGA ATTTGCAGGC GCGCACCCGT GGCACGCTGC TGATGGCGAT CTCCAACAAG
ACCGGCGCCA TGGTGGTGAC CACCGGCAAC AAGTCGGAAA TGTCGGTCGG CTACGCCACG
CTGTACGGCG ACATGAATGG CGGCTTCAAC CCGATCAAGG ACATCTACAA GACCGAAGTG
TTCCGGCTCT GCACCTTGCG CAACGCCTGG AAGCCCGACG GCGCGTTGGG CCCGTCCGGC
GAAGTGATCC CGGTCAACAT CATCACCCGC CCGCCGACCG CCGAATTGCG CGAAAACCAG
ACCGACCAGG ATTCGCTGCC GCCTTATGAC ATCCTCGACG GCATTCTGGA GCGGCTGGTG
GAGCGCGAAC AGCCGCTGGC GGAGATCGTC GCCGCCGGCT TCGATCGCGA CACCGTGGTG
CGGATCGACC GATTGCTCAA CATCGCCGAA TACAAACGCC GGCAGGCCGC GCCGGGCGTG
AAAGTCACGC GAAAGAACTT CGGTCGCGAT CGCCGCTACC CGATCACCAA CCGGTTTCGC
GATTCCGGCG CGCCGCTGCG TCAACCTGAC GAGGCGTTGG TCGCTCGCGC CAGCCGCGCC
ACCAGCGATG CGTTCGAGGG GTGA
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| Protein sequence | MFFMTEQADF KITLAQLNPT VGDIAGNAGL ARAARARAAA DGAQLIVFPE LFISGYPPED
LVLKPAFQAA CRAAVEDLAR DTADGGPAML VGSPWVDGGK LYNACALLDA GAIAAIRFKV
NLPNYGVFDE KRVFCRGPVS GPVTIRGVRV GVPICEDTWM EESADYENVV ECLAETGAEI
LIVPNGSPYA RGKADLRLSV QVARVTESDL PLIYVNQVGG QDELVFDGAS FALNADRTLA
AQLPAFEQSL TTLRWVNGDS GWRCDGAIAP VIEDDEADYA ACVLGLRDYV NKNGFPGVLL
GISGGIDSAL CAAIAVDALG VERVRGVMLP FRFTAQVSLD DAAKLAGALG FKYEVLPIAQ
AVNGFEEILA GTFRGLPRDI TEENLQARTR GTLLMAISNK TGAMVVTTGN KSEMSVGYAT
LYGDMNGGFN PIKDIYKTEV FRLCTLRNAW KPDGALGPSG EVIPVNIITR PPTAELRENQ
TDQDSLPPYD ILDGILERLV EREQPLAEIV AAGFDRDTVV RIDRLLNIAE YKRRQAAPGV
KVTRKNFGRD RRYPITNRFR DSGAPLRQPD EALVARASRA TSDAFEG
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