| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2068 |
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| Symbol | |
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| ID | 3974026 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 2264188 |
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| End bp | 2265375 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637925176 |
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| Product | major facilitator transporter |
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| Protein accession | YP_531941 |
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| Protein GI | 90423571 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.731019 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.214462 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAACA GGCCGCTTGT CGTTATTTTT GCCACCATCT GCCTGGACGC CGTCGGCATC
GGCCTCGTCT TCCCTGTTCT GCCGCGGCTT CTTGAGGATG TCACGCACAG CCCGAACATC
GCGCCCTATA TCGGGATCAT GACCGCGCTC TATGCGGTGA TGCAGTTTGT CTTCGCCCCC
GTGCTCGGTG CTTTGAGCGA CAACCTCGGC CGGCGTCCCG TGCTGCTGAT TTCGCTCGCG
GGAGCGGCCA TCAACTACGT CATCATGGCG TTCGCACCGC AGCTTTGGAT GCTGATGCTC
GGCCGCGCAG TTGCCGGCCT GACCAGCGCC AATGTCTCCG TGGCAACGGC CTACATCACC
GACATTTCAT CCGAGGACCA GCGCGCCCGC AGATTCGGCC TGTCCAACGC CATGTTCGGC
ATCGGCTTTA TCATCGGGCC GGTTCTCGGC GGCCTGCTCG GCGACACCTG GCTGCGGCTG
CCTTTCATCG CCGCCGCCGC GCTGAACGCC GGCAATCTCC TGCTGGCGTT GTTCGTGCTG
CCGGAATCCC GCACGGCGGC CCGTGAGAAG ATCGATCTGG TCGCGCTCAA CCCGCTTCGG
CCGCTGCGTT GGGTGTTCGC CATCAAGGGG CTTTTGCCCG TCGTGTTTGT GTACTTCATC
TTGAGCGCAA CCGGGGAGGC CTACGGCGTC TGCTGGGCGT TGTGGGGTTT CGACACGTTT
CAATGGAGCG GCCTGTGGAT CGGGCTTTCG CTCGGCGCTT TCGGTATCTG CCAAACGCTG
GTGCAGGCCT TGCTGCCCGG CCCCGCGACC AAACTGCTTG GCGAGCGCAT GGCCGTTGTG
GTGGGCATCG CCTGCGCCTG TATCGCTCTT GTCGCGCTGG CCTTCGCCAA TCAAGGCTGG
ATGGTATTCG CCATCATGCC GTTGTTCGCT CTCGCCGGAA TCGGCACGCC GGCGTTTCAA
GCCCTGGCCA CCCGGCAGGT TGATCCGGAC CGTCAAGGTC AATTGCAAGG CGTGCTGGCC
TCGGCCGTCA GCCTGGCGTC GATCGCAGCG CCGCTCGCCT TCTCGACGTT CTACTTTGTC
GTTCAAAACG ACTGGCCCGG AGCCATCTGG CTCTTGGTGG TCGTCATTTA TGCAATCGCG
ATTCCGCTGG TTCTTCTCGG CACCCGGACC GCCCGCGCTG CGACGTGA
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| Protein sequence | MMNRPLVVIF ATICLDAVGI GLVFPVLPRL LEDVTHSPNI APYIGIMTAL YAVMQFVFAP
VLGALSDNLG RRPVLLISLA GAAINYVIMA FAPQLWMLML GRAVAGLTSA NVSVATAYIT
DISSEDQRAR RFGLSNAMFG IGFIIGPVLG GLLGDTWLRL PFIAAAALNA GNLLLALFVL
PESRTAAREK IDLVALNPLR PLRWVFAIKG LLPVVFVYFI LSATGEAYGV CWALWGFDTF
QWSGLWIGLS LGAFGICQTL VQALLPGPAT KLLGERMAVV VGIACACIAL VALAFANQGW
MVFAIMPLFA LAGIGTPAFQ ALATRQVDPD RQGQLQGVLA SAVSLASIAA PLAFSTFYFV
VQNDWPGAIW LLVVVIYAIA IPLVLLGTRT ARAAT
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