| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2065 |
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| Symbol | |
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| ID | 3974023 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 2260439 |
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| End bp | 2261308 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637925173 |
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| Product | 3-hydroxyisobutyrate dehydrogenase |
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| Protein accession | YP_531938 |
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| Protein GI | 90423568 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0398153 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0524626 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAAAG TCGCTTTTCT CGGTCTCGGC GTCATGGGCT TTCCCATGGC GGGACATCTG
GTCGCCAAGG GCGGCCATGA GGTCACGGTG TTCAACCGCA CCCAAGCCAA GGCCAACATC
TGGGCCGAGA AATTCGCCGG CCGCACCGCG CCGACGCCCC GCGAAGCCGC CGAAGGCCAG
GATTTCGTGA TGGCCTGCGT CGGCAATGAC GACGATCTGC GCAGCGTGAC GATCGGCGAC
GACGGCGCCT TTGCCGGGCT CGACGCCGGG GCGATCTTCG TCGACCACAC CACCGCCTCC
GCCGAGGTCG CCCGCGAGCT CGACGCCGAG GCGACCAAGC GCGGCTTCGC CTTCGTCGAC
GCGCCGGTGT CGGGCGGTCA GGCCGGCGCC GAGAACGGCG TGCTGACGGT GATGTGCGGC
GGCAGCGCCG AGGCCTACGC CCGGGCCGAG CCGGTGATCG CCGCCTATGC GCGGATGTGC
AAGCTGATGG GACCGGCGGG CTCAGGACAG CTCACCAAGA TGGTCAACCA GATCTGCATC
GCCGGCCTGG TCGAGGGGCT GTCGGAGGGC ATCCACTTCG CCAAGAAGGC CGGGCTTGAC
GTCAATGCGG TGATCGACAC CATCTCCAAG GGCGCGGCGC AGTCCTGGCA GATGGAGAAC
CGCCACAAGA CCATGACCGA GGGCAAATTC GATTTCGGCT TCGCGGTGGA ATGGATGCGC
AAGGATCTGG CGATCTGCCT CAGCGAGGCC CGCCGCAACG GCGCCAGCCT GCCGGTGACG
GCGCTGGTCG ATGCGTTCTA CGCCGAGGTC GAGAAGCTCG GCGGCCGCCG CTGGGACACC
TCGAGCCTGT TGGCACGGCT GGAGCGCTGA
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| Protein sequence | MAKVAFLGLG VMGFPMAGHL VAKGGHEVTV FNRTQAKANI WAEKFAGRTA PTPREAAEGQ
DFVMACVGND DDLRSVTIGD DGAFAGLDAG AIFVDHTTAS AEVARELDAE ATKRGFAFVD
APVSGGQAGA ENGVLTVMCG GSAEAYARAE PVIAAYARMC KLMGPAGSGQ LTKMVNQICI
AGLVEGLSEG IHFAKKAGLD VNAVIDTISK GAAQSWQMEN RHKTMTEGKF DFGFAVEWMR
KDLAICLSEA RRNGASLPVT ALVDAFYAEV EKLGGRRWDT SSLLARLER
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