| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2048 |
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| Symbol | |
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| ID | 3973967 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 2227418 |
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| End bp | 2228968 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637925157 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_531922 |
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| Protein GI | 90423552 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCCGG TTCATGACAT GTTGCGCCGA ACGGCGCGCG ACCGCCCCGA CAAGGAGGCG
ATTGCCTGGC ATGGCGGGCG CATCAACTAT GCGACGCTCG ACGAGATGTC GAGCCAAATC
GCAACATTCC TTAAAGACGC CGGCGTTGAG CGCGGCATGC GCGTCGCGAT CTACTCCGCG
AAATGCGTCG AGGAGGTCGC GGTGATCTTC GCCATCATGA AGCTCGGCGC GGTCCTGGTC
CATGTCAACC CTGCGTTCCG CGACGACAAG CTCCTTCACG TGCTGGCGGA GTGCGAGCCC
GCTGCCTTGT TTTTTCATCC GAGCAAGCGC GGAGCGGTCG CGCGCGCCGC CCGCGCCTCG
GCGCTGCCGC CGCTGCTGAT CCGGTTCGGC GCCGACGGCC CGGTGGTCGC CGCCGACCCG
GATGCGGGTT GCGTCGCGGC GATCGAACTC TCGACAATCC TGCACGATCT GGCTGCGGCC
GGCGAGACTT TCGCCGACGT TTTCAGCGTC GCTGACGATC TTGCGGCGAT CATCTACACC
TCCGGCACCA CGGCGTCCGC AAAGGGCATC ATGGTCACCC ACGGGATCCT GTCACAGGCG
ACGCTGGTCT CTGCGCAACT GCTCGGCAAC GTCGCCGATG ACCGCCTGAT CAGCTTGACG
CCGTTCTCGT TCGACGGCGC GTTGAGCCAG CTCTTCACCA TGACGTTGGT CGGCGGGACG
CTGGTTCTAC AGGACTCGCT GTTTCCGAAG GATGTGCTGG CGACGCTCAC CGCCGAGCGG
ATCACCGGCG TTCATGCGGT TCCCTCGTTC TGGCGCATGA TGCAAGACCG CTACCCCGTC
TTCGCCGACG CGGCGCTGCC TTGCCTGCGC TACCTGTCAT TGATCGGGGA GAGTTTTCCC
GAGGCCGACC TGCTTCGGCT CAAGCGCACG CTGGCGTCGA CGGATTTCTA CATGATGTAC
GGAACCACCG AGGCGTTCCG ATCGACCTGT CTTGCTCCGG CGGAGTTCTT TACCAAGCGC
GGCTCGGCCG GCCGGCCGCT GTCCGGCGTG ACCATCGGCA TCGTTGACGA GCACGGACAG
CCCTGTCCCC CAGGCACCGT CGGAGAGATC GTGCATGCGG GCGCGTTCGT GTCGCCCGGG
TATTGGAAGC GTGCGACATC CACGACCTTT CGCGACGGTC GCATCTACAC CGGAGATCTC
GGCACGCTTG ATGCAGACGG CTATCTCCGC TTCGTCGGCC GCAAGGACAC CATGGTCAAG
CGGCTCGGCT ATCAGCTCTA TCCCGAGGAC GTCGAGGCCT GCCTGCAAAC GCTCGACGGG
GTCGCGCTGG CCGCGGTGAC CTGCCGACCG GACCCCAGCG GCGCGCAAGC GTTGCGCGCC
TTCATCGTGT GCCGACGCGG CGCGACACTC GGCGAGACCG CGGTTGCGCA ACACTGCCGG
CGGCATTTGC CTTACTACAT GGTCCCGGAC GACGTCGTCT TTGTCGACAG CCTGCCTACG
ACGGGCAACA GCAAGATCGA CCGCGGCCGC CTGAGGATGG AGCAGGTGTG A
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| Protein sequence | MIPVHDMLRR TARDRPDKEA IAWHGGRINY ATLDEMSSQI ATFLKDAGVE RGMRVAIYSA
KCVEEVAVIF AIMKLGAVLV HVNPAFRDDK LLHVLAECEP AALFFHPSKR GAVARAARAS
ALPPLLIRFG ADGPVVAADP DAGCVAAIEL STILHDLAAA GETFADVFSV ADDLAAIIYT
SGTTASAKGI MVTHGILSQA TLVSAQLLGN VADDRLISLT PFSFDGALSQ LFTMTLVGGT
LVLQDSLFPK DVLATLTAER ITGVHAVPSF WRMMQDRYPV FADAALPCLR YLSLIGESFP
EADLLRLKRT LASTDFYMMY GTTEAFRSTC LAPAEFFTKR GSAGRPLSGV TIGIVDEHGQ
PCPPGTVGEI VHAGAFVSPG YWKRATSTTF RDGRIYTGDL GTLDADGYLR FVGRKDTMVK
RLGYQLYPED VEACLQTLDG VALAAVTCRP DPSGAQALRA FIVCRRGATL GETAVAQHCR
RHLPYYMVPD DVVFVDSLPT TGNSKIDRGR LRMEQV
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