| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_2039 |
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| Symbol | |
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| ID | 3973958 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 2221235 |
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| End bp | 2222446 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637925148 |
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| Product | hypothetical protein |
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| Protein accession | YP_531913 |
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| Protein GI | 90423543 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.417724 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTTGC GATCGCTGAG CGCCAACCGG CTGCGCTCGG CGCTGACGAT GGTCGGCATC
GTCGTCGGCG TCGCGGCGGT GATCGCGGTA ATGGCGGTGG GCGAGGGCGC ACGGGCGGCG
GTCGCGCAAC AAATTCGCGC GCTCGGTGCT AGCCTGATCA TCGTGACCTC CGGCGCCGGC
TTCCAGAGCG GCCTGCGCCT CGGTGCGGGC ACCACGTCTA ACCTGTCGGA AGCCGATGCC
GATGCCATTC AGAACGAGAT TCCTGAGGCC GTCACCGCCT CGCCGTTCCT GCGCACTCAG
GCGCAAGTCC TCGGCAATGG AACCAACACC GCGACCTCGG TGTTCGGCGC GGACAACCGC
TTCCTGACCG CTAGAGAATG GGATGTGGAA ATCGGCCGGC GGTTCGATGC CGAGGAAAGC
CGCAGCGGGG AAACCGTCGC GCTGATCGGG CGGACCGTGG CCGGCTTGCT GTTCCCCGAG
CAGAATCCGA TCGACGAACA GATCATCATC CGCGGCGTTC CGCTGCGGAT CATCGGCGTG
CTCGCGGTCA AAGGCCAGTC GATGGTGGCG CAGGATCAGG ACGACCTGGT GATCGTGCCG
ATCGACGTCG TGCGGCGGCG CATCATTGGC GGCAACCCGA CTGGCGACGG CAGCGTCGGA
GCGATCCTGG TCAAGGCCGA AGACGGCGCG GTGCTGTCCG AAACCAGCCA ATCGGTCCGC
GCCTTGCTGC GGCAACGCCA CCGGCTGGTC TCCGATCAGG AGGACGATTT CCAGCTTCGA
AATCTCACCG AAATCATGAA TGCGGTGGCC TCCAGCGCCA ACGCGGTGTC GTTGCTGCTG
GCCGCCGTTG CGGCGATTTC GCTGTTCGTC GGCGGGGTTG GAATCATGAA CATGATGCTG
GTCGCGGTGA CCGAACGGAT CCCGGAAATA GGACTGCGAC TGGCGATCGG GGCGACACGA
GCCAACATCC TGGCGCAGTT TCTCGCCGAG GCCGGCCTGC TGGCTGCGAC CGGCGGCGCG
GTCGGCGTGG CCATCGGCTG GGGATTGGCG GCGGCGATCG CGGCGATCGC CGCGTGGCCG
ACACTGATCG CTGCGCATCA TGTGCTGGGC GCGCTGTTGT TCTCCGCCCT GGTTGGCCTG
GTGTTCGGGT TCGTGCCGGC GCTGCGGGCC TCCCGGCTCG ATCCGATCGT CGCGCTGAGA
AGCCTGTCAT GA
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| Protein sequence | MALRSLSANR LRSALTMVGI VVGVAAVIAV MAVGEGARAA VAQQIRALGA SLIIVTSGAG
FQSGLRLGAG TTSNLSEADA DAIQNEIPEA VTASPFLRTQ AQVLGNGTNT ATSVFGADNR
FLTAREWDVE IGRRFDAEES RSGETVALIG RTVAGLLFPE QNPIDEQIII RGVPLRIIGV
LAVKGQSMVA QDQDDLVIVP IDVVRRRIIG GNPTGDGSVG AILVKAEDGA VLSETSQSVR
ALLRQRHRLV SDQEDDFQLR NLTEIMNAVA SSANAVSLLL AAVAAISLFV GGVGIMNMML
VAVTERIPEI GLRLAIGATR ANILAQFLAE AGLLAATGGA VGVAIGWGLA AAIAAIAAWP
TLIAAHHVLG ALLFSALVGL VFGFVPALRA SRLDPIVALR SLS
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