Gene RPC_2007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_2007 
Symbol 
ID3973870 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2183340 
End bp2185475 
Gene Length2136 bp 
Protein Length711 aa 
Translation table11 
GC content69% 
IMG OID637925117 
Productphosphate acetyltransferase 
Protein accessionYP_531882 
Protein GI90423512 
COG category[C] Energy production and conversion 
COG ID[COG0280] Phosphotransacetylase 
TIGRFAM ID[TIGR00651] phosphate acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACGC CGTCGCGCCA TCGTACTTTC TATCTTGTCC CGGTGTCCCG CGATGCCGGG 
CTCACCTCCG TGACGCTCGG TCTGGTCAGG GCCCTGCACC TCACCGGCCT ACGGGTCGGG
TTCGTCAAGC CGATCGTGCA GCCCGAGGTC CGCTCCGGTG ATCTGGACCT TGCGGCGCAT
TTTGCCCGCA CCTTGTGCGG GGCCTCCGCG CCGGATCCAA TTTCGATCGA TCACGCCGCC
GAGATGGTGC GCTCCGGCCA GCTCGGCGGG CTGATGGAAG AAGTGGTGTC GATGGTCGAC
ACGGTGCGCG CCGACTGCGA CGTGGTGATC GTCGAGGGTC TCATTCCCAA CGTCGATTTC
CAGATCGCGA CGAGGTTGAA CATCGAGATC ATCCGCTCGC TCGGCGCCGA TCTCATTCCG
GTGTTGGCCG GCGGCGCGCA CAGTGCGGCG GCGCTGGCCG CGAAGGCCGC CGCCGCCGCC
GAGCAATATG GCGACGATGG CCGTCGGCCG ATCGCGGGCC TGTTGATCAA CCGCTGCGCC
GATGCCGCGG CGGCGACGGC GTTGTCCGCG CTCGGCGCGC TGACGCTGAA GGGCTACTCC
ACGCCGGTTC GAATCCTCGC CGCGGTGCCG AACGCCGCGC ATCTGCGGGC GCCGCGATTG
ATCGACATCG CCGATGATCT TGGGCTGAGC ATCCTCAACC GCGGCGACAT CGAGAGCTCG
CGGGTGCAGA CCGTGGTAGT CGCCGCGCGC TCGGCGGAAA AGCTGTTCGG CGATCTGCGG
CCCGGAACTC TGGTGGTGAC GCCGGCCGAT CGCAGCGACG CAATCCTTGC GGCCGCGTTG
GTGGCGCAAC GCGGCATGCC GCTGGCCGGC TTCGTGTTCA CCTGCGGCGG GCGTCCGGCG
CCCGAGGTGG CGGCGGTGCT GGCGGCGGCG CCGCTCGATC GGCTGGCGCT GCTCTGCACC
GAAGATGATA CGTTTATCAC CGCCTCGAAG CTCGCCAACC TGTCGGCGCA CGTCAACCGC
GCCGATGCCG ACCGCATGGA GCGGGTGATC TCGTTCATCG CCGAGCAGGT CGACACCGCG
CCGCTGGCGG ATCGTCTCAA CCTGCCGGTC GACGGCTTGA TGCCGCCGCC GGTGTTCCGG
CATCGTCTCG TCGAGCGGGC CCGCGCCGCC ATCCGTCGGA TCGTGCTGCC CGAAGGCGAG
GAGCCGCGCA CCATTCGCGC CGCCGCGATC TGCGCGGAGA AACGCATCGC CCACTGCATC
CTGCTCGGCG CGCCGGAGCG CATCCGCGAG GTCGCGGCGG CGCACGGCAT CGACCTGCCG
GACAGCGTCG AGATTGTCGA TGCCGAACAG CAACGCAGCC GCTACGTCGC GCCGCTGGTC
GAGCTTCGCA AAGCCAAGGG CCTGACCAAA CTGCAGGCCG AGATCATGCT GGAAGATGCC
GTGGTGCTCG GCACCATGAT GCTGGCGCAA AACGATGTCG ACGGACTGGT GTCCGGCGCC
ATTCACACCA CCGCCTCGAC GGTGCGTCCG GCGCTGCAGC TGATCAAGAC CGCGCCGGGC
TCCAGCATCG TCTCCAGCGT GTTCTTCATG CTGATGCCGG ATCAGGTGCT GGTCTATGGC
GATTGCGCGA TCAACCCGGA TCCGACCGCC GACGAACTCG CCGAGATCGC GATTCAGTCG
GCCGACTCCG CCGCCGCGTT CGGCATCGAG CCGCGGGTGG CCATGATCTC CTACTCGACC
GGCGCGTCCG GCGCCGGCGA GGACGTCGAC AAGGTGCGCC GCGCCACCGA CAAGGTGCGG
GCGCTGCGCC CGGATCTGAT CGTCGACGGC CCGATCCAAT ACGACGCCGC CACGGTGGAA
AGCGTCGGCC GGCAGAAGGC GCCGGGCGGC CCGCTCGACG GCCGCGCCAA CGTCTTCATC
TTCCCCGACC TCAACACCGG CAACACCACC TACAAGGCGG TGCAGCGCTC GGCCAACGTC
ATCTCGGTCG GCCCGATGCT GCAGGGGCTG CGCAAGCCGG TCAACGACCT GTCGCGCGGC
GCCCTGGTCG ACGACATCGT CTACACCATC GCGCTCACCG CGATCCAAGC CGCCGCCCGC
GACGCCGGCG GCAAGTTGGC CGCGGCGGCA GAGTGA
 
Protein sequence
MNTPSRHRTF YLVPVSRDAG LTSVTLGLVR ALHLTGLRVG FVKPIVQPEV RSGDLDLAAH 
FARTLCGASA PDPISIDHAA EMVRSGQLGG LMEEVVSMVD TVRADCDVVI VEGLIPNVDF
QIATRLNIEI IRSLGADLIP VLAGGAHSAA ALAAKAAAAA EQYGDDGRRP IAGLLINRCA
DAAAATALSA LGALTLKGYS TPVRILAAVP NAAHLRAPRL IDIADDLGLS ILNRGDIESS
RVQTVVVAAR SAEKLFGDLR PGTLVVTPAD RSDAILAAAL VAQRGMPLAG FVFTCGGRPA
PEVAAVLAAA PLDRLALLCT EDDTFITASK LANLSAHVNR ADADRMERVI SFIAEQVDTA
PLADRLNLPV DGLMPPPVFR HRLVERARAA IRRIVLPEGE EPRTIRAAAI CAEKRIAHCI
LLGAPERIRE VAAAHGIDLP DSVEIVDAEQ QRSRYVAPLV ELRKAKGLTK LQAEIMLEDA
VVLGTMMLAQ NDVDGLVSGA IHTTASTVRP ALQLIKTAPG SSIVSSVFFM LMPDQVLVYG
DCAINPDPTA DELAEIAIQS ADSAAAFGIE PRVAMISYST GASGAGEDVD KVRRATDKVR
ALRPDLIVDG PIQYDAATVE SVGRQKAPGG PLDGRANVFI FPDLNTGNTT YKAVQRSANV
ISVGPMLQGL RKPVNDLSRG ALVDDIVYTI ALTAIQAAAR DAGGKLAAAA E