Gene RPC_1998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1998 
Symbol 
ID3973861 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2173704 
End bp2174258 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content62% 
IMG OID637925108 
ProductMaoC-like dehydratase 
Protein accessionYP_531873 
Protein GI90423503 
COG category[I] Lipid transport and metabolism 
COG ID[COG2030] Acyl dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACACTC TTCTCAAAGA CACCGTAAAG CCGACGCTGA TCGAGAACGT CACCTATGAC 
GAGTTGGATA TTGGTAGTTC GGCGGGCTTC ATCCGCACGG TGACGCGAAA CGACATCGCC
ATCTTCGCGG CACTCTCCGG CGACGTGAAC CCGGCGCATC TTGACGAGGA ATATGCCGCC
GCCTCGATGT TTAACGGCGT CGTCGCCCAC GGCATGCTCA CCGCGGGGTT CATCTCGACG
ATCCTCGGAA CCATGCTGCC TGGGCCTGGC GCGATCTATT TGAGCCAGAG CCTGCGGTTC
TGTTGCCCGG TCAAGCCCGG CGACCGGATC ACCGTCACGG TGACGGTGAC CGCCAAGGAC
GACGAGAAGA AGCGGGTTAC GCTGGACTGC CGCTGCTTGA ACCAGGACGG CACCGATGTG
GTTGTCGGAA CCGCTCTTGT GATCGCGCCG GTCGAACGGA TTGTGCGGCA GCGCCCCGAT
TTGCCGGAAC TGCAAGTGCT CCACCATGAG AGACACCAGG CACTGCCCCG GCAGTCCCAC
ACCGTCACGG CCTAG
 
Protein sequence
MDTLLKDTVK PTLIENVTYD ELDIGSSAGF IRTVTRNDIA IFAALSGDVN PAHLDEEYAA 
ASMFNGVVAH GMLTAGFIST ILGTMLPGPG AIYLSQSLRF CCPVKPGDRI TVTVTVTAKD
DEKKRVTLDC RCLNQDGTDV VVGTALVIAP VERIVRQRPD LPELQVLHHE RHQALPRQSH
TVTA