| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1991 |
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| Symbol | |
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| ID | 3973782 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 2165986 |
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| End bp | 2166900 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637925101 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_531866 |
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| Protein GI | 90423496 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0781323 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCCTC TTCTAACCGT CTTCGGCCGC TACACCCTGA CCTTCGGCCT TGTCGCGATC
GCCGCGCTCT TCGCGGCGCA ATTGTGGGGG CGCTACGAGC AAAGCCCCTG GACACGGGAC
GGCCGCGTGC GCGCCGACGT GGTGCGTCTC GCGCCCGACG TGTCCGGCCT CGTCAGCCAG
GTGCTCGTGC ATGACAATGA AGAGGTCCAC GCCGGCGACG TTATCTTCCG CATCGATCAG
GCGCGCTATC GGCTTGCCAT GAAAACGGCT GAAGCCAAAG CCGACAGCAG CAAGGCCGCG
CTGGACATGG CCAATCACGA TCTCGTCCGT TATCGCCAGC TCAGCGACAC CACCGTTACC
AGGCAGAAAC TGGAACAGGT GGATACCACC ATGCAGCAGA CAGAGGCGAC CTACCGGCAG
GCGCAACTCG ACCGGGATCT CGCCGCACTC AATCTGGAGC GTTCTTCGGT CAAGGCGCCC
GTTGATGGTA TCGTGACCAA TCTGAGCATC CATCCAGGCG ACTACTTGGC GGCGGGGGCG
CAGGCGGTGG CGCTCGTCGA CACCGCCTCG CTGCGTATGG AGGGATACTT CGAGGAGACG
AAGCTGCGGC GGGTCTCGAT TGGCGACCGC GCCAAAATCC GGCTGATGGG CGAGGATGCG
GAGATCACCG GCCGCGTCGA GAGCATCGCT GCCGCCATCG CTGACGATCA GCGGGACGAC
ACGCGCAATC TTCTCCCGAA AGTCGTGCCA ACTTTCTCTT GGGTCAGGTT AGCACAGCGC
ATCCCGGTCC GGATCCGCAT CGACCCGAGG CCGATGGGCA TCAGGCTGAT CGTGGGCAGA
ACGGCAACGG TCGAGATCAT CCCCGCCAGC TCGACGACCA GCCCCGTCGT CGATGTGGGG
AAAACCGGGA CCTGA
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| Protein sequence | MTPLLTVFGR YTLTFGLVAI AALFAAQLWG RYEQSPWTRD GRVRADVVRL APDVSGLVSQ
VLVHDNEEVH AGDVIFRIDQ ARYRLAMKTA EAKADSSKAA LDMANHDLVR YRQLSDTTVT
RQKLEQVDTT MQQTEATYRQ AQLDRDLAAL NLERSSVKAP VDGIVTNLSI HPGDYLAAGA
QAVALVDTAS LRMEGYFEET KLRRVSIGDR AKIRLMGEDA EITGRVESIA AAIADDQRDD
TRNLLPKVVP TFSWVRLAQR IPVRIRIDPR PMGIRLIVGR TATVEIIPAS STTSPVVDVG
KTGT
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