Gene RPC_1987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1987 
Symbol 
ID3973778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2163272 
End bp2164057 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content69% 
IMG OID637925098 
ProductABC transporter related 
Protein accessionYP_531863 
Protein GI90423493 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGCCC GCCTCACATT GCAGGATGTG GCGATCGGTT ACGACGATCG AGCGCTGGTC 
GAGGGCATCG ATCTCGAACT TCGCGGCGGC AGCACCACCT GCCTGATGGG GCCGAACGGC
GTCGGCAAGA CCACGCTGTT CAAAACCCTC CTCGGCCTGC AGCCGGCTTT GCAGGGGCGC
GTGCTGATCG GCGGCGACGA CGTCGCGACG CTGAGCCGAG AGCAGATCGC GCGCCGCATC
GCCCACGTCC CGCAAGCCTA CCTCGGCGAT CCGAGCCATA CGGTGATCGA CATCGTCGTC
ATGGGTCGCA CCGCGCGGCT CGGCCTGTTC AGCGCGCCGG GTCGCGACGA CGTCGCGGCG
GCATGGCGCG CGCTGGAGGC ACTCGGCATC GCCGACATCG CCGAGCGATC CGCCGATCGG
ATCTCCGGCG GCCAACGGCA ACTGATGTTG ATCGCCCGCG CGCTGGTGCA GGACACCGAG
CTCATCGTGA TGGACGAGCC GACCGCCAGC CTCGACCTCG GCAACCGCCT GGCCTTGCTC
GACCAGATCC GCACGCTAGC GGCACAAGGC CTGTCGCTGC TGGTGTCGAC GCACGAGCCG
GAACATGCTT TCGCGATCGC CGACCGCGTC GCCATGATCG GCCGCGGTCA GCGCTTCGAG
GTCGGCTCCG TGGAGGAGAT TCTGACCTCG GCCCGGCTCA GCGATCTTTA CGGCCTTGCG
CTTGGCCTCG AGACCACCCC GTCGGGCCGT CGCGTGGTGA CGCGCGCCGC CCCGTTCCCC
ATCTGA
 
Protein sequence
MTARLTLQDV AIGYDDRALV EGIDLELRGG STTCLMGPNG VGKTTLFKTL LGLQPALQGR 
VLIGGDDVAT LSREQIARRI AHVPQAYLGD PSHTVIDIVV MGRTARLGLF SAPGRDDVAA
AWRALEALGI ADIAERSADR ISGGQRQLML IARALVQDTE LIVMDEPTAS LDLGNRLALL
DQIRTLAAQG LSLLVSTHEP EHAFAIADRV AMIGRGQRFE VGSVEEILTS ARLSDLYGLA
LGLETTPSGR RVVTRAAPFP I