| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1976 |
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| Symbol | |
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| ID | 3973649 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 2150473 |
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| End bp | 2152962 |
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| Gene Length | 2490 bp |
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| Protein Length | 829 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637925087 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_531852 |
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| Protein GI | 90423482 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.935502 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGTTCG GTTTCGGCGT GGGCGCCTCA AATGCGATTA ATAACGACAG AGTGACAAAA
CGCGCGCGTC GGCTGCTGCC CACCCTGATC TCCACCACGA TGCTGGGCAG CGCCAGTCTG
TTCGCCGCGA CCGCGGCCAC CGCGCAGCAA GCCCAGCCGC CGGCCGCTCA GCTGGTGACC
CTCGCCATCC CCGCACAGCC GCTGGCCTCG GCAATCGCCG CCTTCATTCG AACGACCGGG
TGGGAGGTCG GCTATTCCTC GCAGATCGTC GGCGGCAAGA CCTCCTCGGC GGTGTCCGGC
GTGATGCCGC CGCAACGCGC GCTGCAGACG CTGCTGGCCG GCACCGGGCT TCGCGTTCGT
GCCACCGGCC CGACCACCGT CGCTCTGGTC GATCCCAGGA TGACCGCGAT CGACGCCATC
GCCGGCGACG GCGTCATCGC GATCGATACG ATCAACGTCG ACGGACAGTC GGCGTTCGAA
CATGTCGACG GCTACGTCGC GCAGAACGCG TCGACCGGCA TGAAGGGCGA CATCCCGATC
CTGCAGACCC CGCAGGCGAT CTCGGTCGTC ACCTCCGATC AAATCAAGGA CCAGGGCGCC
CAGAGCATCA ACGAAGCGCT GCGCTACACC GCCGGCGTCC GCACCGAGGC CAGCGGATCG
CAGGCGCTCG ACAATCCGCT GTACGTCCGC GGCTTCTTGC AGAGCAGTCT CGACACCTAT
CAGGACGGGC TGCGCAGCGT CACCCCGGGC TATTTCGGCT TCTTCGCCAC CGATCCCTAC
GGCCTGGAGC GCGTCGAGGT GCTGAAAGGG CCGACCTCGG TGCTGTTTGG ACAACAGACC
CCCGGCGGCC TGATCAACGC CGTCTCCAAG CGGCCGACCG CCAATCCGGT CAACGAAATC
GAGCTGACCT ATGGCAGCTT CAACCACGCC CAGACCGCGT TCGACATCGG CGGGGCCAGT
CCCGACAAGT CGCTGCTGTA TCGCTTCGTC GGCCTCGGCC GCAACGCCGA CACCCAGGTC
GACTACGTCA AGAACGATCG GGTGTATTTC GCACCCAGCG TCACCTGGCT CCCCAACCCG
GACACCAACC TCACCGTGCT GACCTCCTAC CAGCGCAACG AAGGCGATTT CTACGCCCAG
GTTCCGGCGG CGGCGGTGCT GCTGCCGAAC CGATACGGCC ATATCCCGTT CAGCCGGTTC
CTTGGCGAAC CGAGCTGGGA GGGCGAGACC TCCGAGCGCA CGGCGCTCGG CTACGAGCTG
GAACATCGCT TCAACGAGAC GGTGAAATTC GAGCAGAATT TCCGTTACAC CCACATGACC
AATCATCGGC AATATCTCCA AGCGTCGGGC GCCCTGGTGA ACGAGCGAAC CCTCAATCGC
CGCTACACGC TTCGCGACAT CGACAGCGAC GCCGTCACCG TCGACAACCG CCTGAGATTC
AATTTCGACA CCGGTCCGAT CGAGCACAAG GCGATCGTCG GATTGGACTA TCTGTGGGGA
ACGTCGCATT GGCTGGAACA GAGCGGCGCC GCTGCTTCGA TCGATATCTT CAATCCGGTC
TACGGCGCGG TCGTCAACAC CAACGCCTAC ACCAGCAGGT CGCTGCAGGA CATCACCGCT
TCGCAGGCCG GGCTCTATCT GCAGGACCAG CTGAAGCTCG ACAAGTGGTT GCTGACGCTG
GGCGTCCGCC AGGACTGGGC CTGGCGCGAC ACCGACAATC TGATCGCCAA CAGCTCCCGA
TCGCAGGACG ACGGGGACTT CACCAAGCGG GCGGGGCTGA CCTATCTGTC GAAGTTCGGG
CTTGCGCCCT ACATCAGCTA TGCCGAATCA TTCACGCCGG TGGTCGGCAC CGATCGGCTT
GGCAATTCCT ACCTGCCGGA GACCGGACAG CAATATGAGG TCGGCGTGAA GTACCAGCCG
ACCGGCTACA ACAGCTTCGT GACCCTGAGC GCCTTCGACC TTCGCCGTCA GAACGTCCAG
ACCATCGACC CGGTCAACAC CAACTACTCG GTGCAGACCG GAGAGGTTCG GGTTCAGGGC
GTTGAAATCG AGGCGGTCGC CAGCCTCGAT AGCGGCTGGA GCCTCACCGC GGCTTACACT
TACACCGACG CGGAGATCAC CAAGACCAAT ACCGCCGGCC AGATCGGCAA CACGCCCTAC
CGCGTGCCGG CGCATTCGGC GTCGCTCTGG TTGAATTACG AATTCCAGAC CGCCGCGCTT
GCCGGCTTCG CGGTCGGCGG CGGCGTCCGC TACATCGGCG AAACCTGGGG CGACGACGCC
AACAGCTTCA GGGTTCCGGA ATTCACCCTG GTCGACGCCG CGCTGCGCTA TGATCTCGGC
AAGAAATTCC TGGCGATGAA GGGATTCACC GCCAGCGTCA ACGTCACCAA CTTGTTCGAC
AAATACTACG TGCCGGCGTG CTTCACCGTC AACGCCTGCA ATTACGGCTC GTCGCGAACT
ATCATGGGCA AGCTGGCCTA CCGATGGTGA
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| Protein sequence | MEFGFGVGAS NAINNDRVTK RARRLLPTLI STTMLGSASL FAATAATAQQ AQPPAAQLVT
LAIPAQPLAS AIAAFIRTTG WEVGYSSQIV GGKTSSAVSG VMPPQRALQT LLAGTGLRVR
ATGPTTVALV DPRMTAIDAI AGDGVIAIDT INVDGQSAFE HVDGYVAQNA STGMKGDIPI
LQTPQAISVV TSDQIKDQGA QSINEALRYT AGVRTEASGS QALDNPLYVR GFLQSSLDTY
QDGLRSVTPG YFGFFATDPY GLERVEVLKG PTSVLFGQQT PGGLINAVSK RPTANPVNEI
ELTYGSFNHA QTAFDIGGAS PDKSLLYRFV GLGRNADTQV DYVKNDRVYF APSVTWLPNP
DTNLTVLTSY QRNEGDFYAQ VPAAAVLLPN RYGHIPFSRF LGEPSWEGET SERTALGYEL
EHRFNETVKF EQNFRYTHMT NHRQYLQASG ALVNERTLNR RYTLRDIDSD AVTVDNRLRF
NFDTGPIEHK AIVGLDYLWG TSHWLEQSGA AASIDIFNPV YGAVVNTNAY TSRSLQDITA
SQAGLYLQDQ LKLDKWLLTL GVRQDWAWRD TDNLIANSSR SQDDGDFTKR AGLTYLSKFG
LAPYISYAES FTPVVGTDRL GNSYLPETGQ QYEVGVKYQP TGYNSFVTLS AFDLRRQNVQ
TIDPVNTNYS VQTGEVRVQG VEIEAVASLD SGWSLTAAYT YTDAEITKTN TAGQIGNTPY
RVPAHSASLW LNYEFQTAAL AGFAVGGGVR YIGETWGDDA NSFRVPEFTL VDAALRYDLG
KKFLAMKGFT ASVNVTNLFD KYYVPACFTV NACNYGSSRT IMGKLAYRW
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