Gene RPC_1975 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1975 
Symbol 
ID3973648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2149867 
End bp2150382 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content67% 
IMG OID637925086 
Producthypothetical protein 
Protein accessionYP_531851 
Protein GI90423481 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3721] Putative heme iron utilization protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.157638 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAGGA CCGATCTCGT CGCGCTCGCG ACCTACCTTG CTGAAAATCC CGGTGCGGTG 
ATCGAGGAGG TCGCGCGCGA GCGCAACGTC TCGCCGCGAA CCGTGCTTGA GGCCCTTCCG
GACCGAATGG TGCGGATCGG GCCGGGCGAT GCCTTCGTGC CGGCGATGCG GGACATCGCG
CAGTGGGGCG AGGTCACGCT AATCGTGCAC ACCGTGGACG CAATCTTCGA GTTCACCGGC
GCGATCCCCC AAGGCGAGAT CGCTCGCGGC TATTTCAACC TGATGCAACC CAAGGGCCTG
CACGGCCATC TGCGGCACGA GCGCTGCGCC GCGGTGGCCT TCGTCGAGCG CCCATTCATG
GGCAAGGCCA CCGCCTTCCT CGCGTTTCTG AACGCCGAGG GCGGCATCAT GTTCAAGGTG
TTCGTCGGCC GCGACGAGAC TGGGGCGCTG CGCGCCGATC AATTGCAGCG CTTCCAAGCG
CTCGCCGATC GGGTCGGTGG CAGCGGCGTC GCATGA
 
Protein sequence
MLRTDLVALA TYLAENPGAV IEEVARERNV SPRTVLEALP DRMVRIGPGD AFVPAMRDIA 
QWGEVTLIVH TVDAIFEFTG AIPQGEIARG YFNLMQPKGL HGHLRHERCA AVAFVERPFM
GKATAFLAFL NAEGGIMFKV FVGRDETGAL RADQLQRFQA LADRVGGSGV A