| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1973 |
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| Symbol | |
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| ID | 3973646 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 2147026 |
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| End bp | 2149377 |
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| Gene Length | 2352 bp |
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| Protein Length | 783 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637925084 |
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| Product | TonB-dependent haem/haemoglobin receptor |
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| Protein accession | YP_531849 |
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| Protein GI | 90423479 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01785] TonB-dependent heme/hemoglobin receptor family protein
[TIGR01786] TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.41369 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGGGC TGAGCACGCG CGCCTGCGCG TTACTTCTAT CTGTATCTGT TGTTTCGCTG
GCCACCGCGC CAAGCTACGC ACAATCGGCG GCGCCGGAAG CGCAGGCGCC GCAACCGGCA
AAACCCAAGC CGGCCAAGCG CAAGCGTGCG GTGGTCGAGC CGGCACCTGC GGCGCTTCAG
GCGCGCGCGC AGATCGGCCA GCCGACCTAT CAGTCGCTCG ACGTCATCAC CGTCGCCGCC
AGCAAGACTG AAGAGAGGGC GATCGACGCG CTGGCCCCGG TCAGCGTGGT GACGCTGGAG
CAAATCCAGG GCATTCAGCC GAACCGGCTG GCCGACGTGT TCCGCGCCGT GCCCGGGGTG
TCGTTCCAGG ATCGCGGCGA CGATCCGGCG ACCGCGATCA ATATCCGCGG CCTGCAGGAT
TTCGGCCGGG TCGCGGTGGT GGTCGACGGC GCGCGGCAGA ACTATCAGCG CACCGGCCAT
AACGCCAACG GCTCGTTCTT CCTCGACCCG GAACTGATCG GCAGCATCGA CGTGGTGCGC
GGGCCGACCG CGAACATCTA CGGCTCAGGC GCGATCGGCG GCGTGGCGTC GTTTCGGACC
AAGGACATCA ACGACGTGCT GCGGCCGGGC GAGCGTTGGG GCGTCGACCT CAACGGCGCG
GTCGGCTCCA ACAACGGTCG CGGGCTCGGC TCGGTGTTCG GCGGTGTCCG CGTCGATCCC
ACCGTCGACG TGTTCGGCGG CGCGGTCTAC CGCACCCAGG GCAACTACAA GGACGGCGCG
GGCACCGAAA TCGGCAACAC CGGCAACGAG ATCGCCGCGG GGCTGCTCAA GCTCACGGTG
CGGCCCGCCG ACGGCCACGA GATCAAATTC GGCGGCGTGT TCCAGGACTA TCAATACAGC
ATCGGCCAGT TCAACCGCGG CGCGACCACT ACGGCGGCGC CGGCGAGTGC GATCGCCGGG
TCCTCGGTTT ACGATTCCGA CGCCAAGAAC TACACCGGCA CGCTGAACTG GAAATACTCC
AAGCCAGACG ACATGTGGTT CGACTGGAAT ATCAGCCTGT ACGGCAATCG CACCGACAAC
GATCAGGTCA AGACCTACAA CAACCGGATC TCAGCCGGCA GCGGCGTCTG CACGATTGCC
AATCCCGGCA ACAACATCTC CGGCTGCGTC GGCGACAGGC GCGGCTATCT GCTGGACACC
ATCGGGTTCG ACGTCAACAA CACCAGCCGT TTCGATCTCG GCGACTGGCG CAACGCCGTC
ACCTACGGCG TCGATGCCTT CCAGGACGAC GTTTCAACCT GGGACAGCCG CGGCAATTCC
AACATCACCA CGCCGAGCGG AACGCGCACC GTATCCGGCG GCTTCGTGCA GCTGAAGAAC
AACTATTCCT CGTGGCTCGA GGTGGTCAGC GCGCTGCGCT ACGATCATTA TGAACTCGCC
TCGGGCGCGA CGAGCGCCAG CGGCGAACGC CTGTCGCCAA AGATCTCCGT CGGCGTCACG
CCGCTGCAGG GTTTCACGCC CTATGTCAGC TACGCCGAGG GCTATCGCGC CCCCTCGATC
ACCGAGACGC TGATCTCGGG CGGGCACGCC ACCGGCGGCG GCCCGGTGTT GTTCAACTGT
CCGGATGGCA CCTCGGGGCT GTTCTGCTTT CTGCCCAACG CCGCCTTGCG GCCGGAAGTC
GGCAAGAACA AAGAGGTCGG CGTCAACCTG AAATACGACA GCGTGTTCAC GGCGGGCGAC
AGCTTCCGCG GCAAGTTCAA TCTGTTCCGC AACGATATCG ACGACTACAT CGATCTCGTC
GCATCGACCC CGGAACGATA TACGTCGATC TTCATGGGCT TCCCGATTTC CGGAACGTCG
AGCAAATATT ATCAGTACCA AAACACGCCG CACGCCCGGA TCGAGGGCTT CGAGGCCGAA
ACCATGTACG ACGCCGGACA ATGGTTCGCT GGCGTGTCGG CGACCGTGCA GCACGGCAAG
AACACGCAGA CCAATATCGG CCTGGCCACC GTGCAGCCGC GCAAGGTGAC GACCAGCGGG
GGAGTGCGGT TCCTGGAACG AAAGCTGACG ATTGCGGCGC TATGGTCGGC GGTCGCCGCC
AATACCGATA TCCCGGTTGG ATATCTGCCG TCGACCGCGT ACGATCTGGT CAACCTCTAT
GTGACCTACC AACCGACCGC CGACATCACG TTGAGCTTTT CGGTCGACAA CGTTCTGAAC
GAGTACTATC GGCCGTATGC AATTCCTAGC TCGGCAAGCG ACGGGACCAC GCAAAACGAT
GCCATTTGGA GCAGCCCCGG TCCCGGCATC GTCTACAAGG GAGGATTGAA AGTCCATTTC
GGAGGCGCTT AG
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| Protein sequence | MLGLSTRACA LLLSVSVVSL ATAPSYAQSA APEAQAPQPA KPKPAKRKRA VVEPAPAALQ
ARAQIGQPTY QSLDVITVAA SKTEERAIDA LAPVSVVTLE QIQGIQPNRL ADVFRAVPGV
SFQDRGDDPA TAINIRGLQD FGRVAVVVDG ARQNYQRTGH NANGSFFLDP ELIGSIDVVR
GPTANIYGSG AIGGVASFRT KDINDVLRPG ERWGVDLNGA VGSNNGRGLG SVFGGVRVDP
TVDVFGGAVY RTQGNYKDGA GTEIGNTGNE IAAGLLKLTV RPADGHEIKF GGVFQDYQYS
IGQFNRGATT TAAPASAIAG SSVYDSDAKN YTGTLNWKYS KPDDMWFDWN ISLYGNRTDN
DQVKTYNNRI SAGSGVCTIA NPGNNISGCV GDRRGYLLDT IGFDVNNTSR FDLGDWRNAV
TYGVDAFQDD VSTWDSRGNS NITTPSGTRT VSGGFVQLKN NYSSWLEVVS ALRYDHYELA
SGATSASGER LSPKISVGVT PLQGFTPYVS YAEGYRAPSI TETLISGGHA TGGGPVLFNC
PDGTSGLFCF LPNAALRPEV GKNKEVGVNL KYDSVFTAGD SFRGKFNLFR NDIDDYIDLV
ASTPERYTSI FMGFPISGTS SKYYQYQNTP HARIEGFEAE TMYDAGQWFA GVSATVQHGK
NTQTNIGLAT VQPRKVTTSG GVRFLERKLT IAALWSAVAA NTDIPVGYLP STAYDLVNLY
VTYQPTADIT LSFSVDNVLN EYYRPYAIPS SASDGTTQND AIWSSPGPGI VYKGGLKVHF
GGA
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