| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1969 |
|---|
| Symbol | |
|---|
| ID | 3973642 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | - |
|---|
| Start bp | 2143102 |
|---|
| End bp | 2144091 |
|---|
| Gene Length | 990 bp |
|---|
| Protein Length | 329 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637925080 |
|---|
| Product | periplasmic binding protein |
|---|
| Protein accession | YP_531845 |
|---|
| Protein GI | 90423475 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4558] ABC-type hemin transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCGCC GCGCTTTCAA ACCGTTTTCA TGGTCCGCGG GACGCCACTT CGCGTTCGTG
GCGACGATGA TCTGCGGCGT GGCCGCGCCC CTCGCGGCCG TCCACGCCGG CGGCGTCGTG
GTCCGCGACG CGCGAGATCG CGATGTGGAG ATCGAAGATC CCTCGCGCAT CATCGCCATC
GGAGGTTCGA TCACCGAGGT TCTGTTCGCG CTCGGTCTTG ACGGCCGGAT CGCGGGAGTG
GATTCCACCA GCCTGTATCC GCCGACTGCG CTGCAAGAAA AGCCCAATGT CGGCTATCTG
CGGCAGCTGT CCCCGGAAGG CGTGATCGGG TTGAACCCGA CGCTGATCCT CGCCATGCAG
GGCGCAGGCC CGAAGGAAAC CATGCAGGTG ATCGAAGCCG CACGAATTCC GCTGGTCGTG
GTTCCGGAGG ATTTCTCCGA GCAAGGCCTG CTCGACAAGA TCAGCCTGGT CGGCCACGCC
ATGGGCGCCG ATCGCGGCGC CGCCTGCCTC ACCGCCGCGG TGTCCGGCGA TCTGGCGAAA
CTGCGCGAGC TGCGCGCCAG GGTGACGAAG CCGGTGCGGG TCATGTTCGT GATGGCGCTG
GTCAATGGCC AGGCGATGGC CGCCGGCCAC AACACCGCGG CCGACGAGAT CATCAAGCTG
GCCGGCGGCA TCAATGCGGT CGACGGCTAT GACGGCTACA AGCTGATCAA CGACGAAGCC
ATCGTCGCGT TGCGGCCGGA GGTAGTGCTG TCGATCCAGC GCAGCAAGGA TTCGCTCGAG
GCCGAGGCGA TCTACCATCA TCCCGCCTTC GCGCTGACAC CGGTGGCCGC GAACAAGGCC
TTCATCTCGA TGGAGGGCCT CTATCTGCTG GGCTTCGGCC CGCGCACCGC GGCTGCCGCC
CGTGACGTCG CGGCGAAACT ATATCCGGAG CTCGCGGACG AAGCTGCGAA ATTCCAATCC
GCGGCGTTGA CGGCGAACTG TCGCCAATGA
|
|---|
| Protein sequence | MSRRAFKPFS WSAGRHFAFV ATMICGVAAP LAAVHAGGVV VRDARDRDVE IEDPSRIIAI
GGSITEVLFA LGLDGRIAGV DSTSLYPPTA LQEKPNVGYL RQLSPEGVIG LNPTLILAMQ
GAGPKETMQV IEAARIPLVV VPEDFSEQGL LDKISLVGHA MGADRGAACL TAAVSGDLAK
LRELRARVTK PVRVMFVMAL VNGQAMAAGH NTAADEIIKL AGGINAVDGY DGYKLINDEA
IVALRPEVVL SIQRSKDSLE AEAIYHHPAF ALTPVAANKA FISMEGLYLL GFGPRTAAAA
RDVAAKLYPE LADEAAKFQS AALTANCRQ
|
|---|
| |