Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_1968 |
Symbol | |
ID | 3973641 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 2142008 |
End bp | 2143105 |
Gene Length | 1098 bp |
Protein Length | 365 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637925079 |
Product | transport system permease protein |
Protein accession | YP_531844 |
Protein GI | 90423474 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0609] ABC-type Fe3+-siderophore transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGTGG CGGAGGCGAT CCACGAGCAA CGCAGCGAGC GCAGCACCCG CGCGTTGCGG CCGTCGGCGA TCTTGATTTT ATCCACCCTG CTGGCGGCGC TGCTCGCAAC CGCGCTGATC GCGCTGACCG TCGGTGCCGC CGGCATTCCG CTGTCGCGGC TTCCCGCCGC ACTCGGAATC GCCGAACCGG GCTCCGGCAA CACGCTGGCG GTGCGCGATC AACTGGTGCT GTGGTCGATC CGCGTGCCGC GCATCGTCGC CGCGGCGATG GTCGGAAGTT TGCTGGCGGT GGCTGGCGCA CTGATGCAGG GCCTGTTTCG CAATCCGCTG GCCGACCCCG CCCTGGTCGG CGTGTCGAGC GGCGGCGCGT TTGCCGCGGC CACCGCGATC GTGATCACCG ACAGTGCGCT CGGCGCGCAG CTTCGGTTCA TGCAGAACGA ATTGCTGCCG ATCGCCGCCT TCGTCGGATC GCTGGCGACC ACTATGATCC TGTATTCGAT CGCAAGCCGC CAAGGCCGCA CCTCGATCGC GATGTTCCTA CTCGCGGGCC TGGCGATCGC CGCGATCGCC AATGCCGGCA TCGGCGTGCT GGTCTATGTC GCCGACGATC GGCAGCTGCG CGACATCACA TTCTGGATGT TGGGCTCGCT CAGCGGCGCC ACCTGGGCCA AGACCGCGAC GATCGCGCCG GTGCTGGCGA TCGCGCTGTT GGTCTGCGCC GTGATCGCAC GACGGCTCGA CCTGCTGGTA CTGGGCGAAT CCGAGGCGTT TCACAGCGGC GTCGACGTCG AGCGGTTGAA ACGGTTGTCG ATCGTGCTGA TTTCCGCGAT GACCGGCGTC GCGGTGGCGA TATGCGGCGT GGTCGGATTC ATCGGCATCA TCGTGCCGCA TCTGTTGCGC CTGGTGATCG GTCCTTCGCA TCGGCTGTTG CTGCCGGCCT CCGCCTTGCT CGGCGCCGTT CTGCTGGTCG GCGCCGACAC GCTGGCGCGC ACGCTGGTGG CGCCGGCCGA AATGCCGATC GGCATCCTCA CCGCCGCGAT CGGCGCGCCG TTCTTCCTGG CGATGTTGTT GCGCCAGCGC GGGCTGATCG GACTGTGA
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Protein sequence | MTVAEAIHEQ RSERSTRALR PSAILILSTL LAALLATALI ALTVGAAGIP LSRLPAALGI AEPGSGNTLA VRDQLVLWSI RVPRIVAAAM VGSLLAVAGA LMQGLFRNPL ADPALVGVSS GGAFAAATAI VITDSALGAQ LRFMQNELLP IAAFVGSLAT TMILYSIASR QGRTSIAMFL LAGLAIAAIA NAGIGVLVYV ADDRQLRDIT FWMLGSLSGA TWAKTATIAP VLAIALLVCA VIARRLDLLV LGESEAFHSG VDVERLKRLS IVLISAMTGV AVAICGVVGF IGIIVPHLLR LVIGPSHRLL LPASALLGAV LLVGADTLAR TLVAPAEMPI GILTAAIGAP FFLAMLLRQR GLIGL
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