| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1961 |
|---|
| Symbol | |
|---|
| ID | 3973634 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | + |
|---|
| Start bp | 2132684 |
|---|
| End bp | 2133469 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637925072 |
|---|
| Product | cobalt ABC transporter CbiQ, permease subunit |
|---|
| Protein accession | YP_531837 |
|---|
| Protein GI | 90423467 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0619] ABC-type cobalt transport system, permease component CbiQ and related transporters |
|---|
| TIGRFAM ID | [TIGR02454] cobalt ABC transporter, permease protein CbiQ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGACG AGGTGGCCGG CGTTCTGGTG ACCGCGGCGC CCCGTCGGAG CTTGCTCGGC
GGTCTCGACG GACGCGTCCG CATCGTCGCG GTCTCCGGGT TCGCCGTCAC CGTCGTGTCG
CTGCAGAATT TGGCGCCGCT GCTGTTGGCC TTGAGCGGCG CCATGGGCAT CATGCTGCTC
GCGCAGCTTC CGATCGCCCG TACCCTTCGC CGCGTCGTGG CGATGGATTC CTTCATCGTA
TTCATGATCG CGATGCTGCC CTTTACGGTG CCGGGTGATC CGGTGTTCAC CGTCCTCGGT
TGGCCGGCGA GCCGGGAAGG CATCATCGAG GCGACGACGA TCGCGCTCAA GGCCAATACC
GTGGTTCTCG CCGCGATGGC GCTATTGTCC TCTCTCGACC CGGTGGCGTT CGGTCGGGCA
CTGGCGCGAC TCGGGATGCC CGAACGTCTG GTCCATCTCA TCATGTTCAA TATCCGCTAC
ATCGACGTGC TCGATCGGGA GCAGCAGCGG CTGCGCGTCG CGATGCGGGC GCGCGGTTTT
CGGCCGGCGA ATTCGCGCCA TACCTATGTG AGTTACGGTT ATTTGATCGG GATGATGCTG
ATCCGCGCGC TGGAGCGGTC GGAGCGAATC CTGCAGGCGA TGAAGTGCCG GGGATTCTCC
GGCCGGCTTT TCCTTGATAC CGAGGAACGC GTCGGAACCA TTGACATCGT CTTCGGTTCG
CTGTTCACCG CATTTGTCGG CGGCCTGATC CTGTGGGAGA TGATGATCCT TGCCACCTCT
CATTGA
|
|---|
| Protein sequence | MPDEVAGVLV TAAPRRSLLG GLDGRVRIVA VSGFAVTVVS LQNLAPLLLA LSGAMGIMLL
AQLPIARTLR RVVAMDSFIV FMIAMLPFTV PGDPVFTVLG WPASREGIIE ATTIALKANT
VVLAAMALLS SLDPVAFGRA LARLGMPERL VHLIMFNIRY IDVLDREQQR LRVAMRARGF
RPANSRHTYV SYGYLIGMML IRALERSERI LQAMKCRGFS GRLFLDTEER VGTIDIVFGS
LFTAFVGGLI LWEMMILATS H
|
|---|
| |