| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1958 |
|---|
| Symbol | |
|---|
| ID | 3973591 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | + |
|---|
| Start bp | 2130602 |
|---|
| End bp | 2131396 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637925069 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_531834 |
|---|
| Protein GI | 90423464 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG5266] ABC-type Co2+ transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAAACTCT TCAAATCAAC CTTAGCCGCC GGTGTGTTCG CCTGCTTCGC GGCGGCACCC
GCCGAATCCC ACTTCCAGCT GATCTATACG CCCGAAGTGA ATCTGGAGAA GCCGGCGGAG
ATCCCGCTGT TGCTGGTGTT CTGGCATCCG TTCGAAAATG GCCACGTCAT GGACATGGCC
AAGCCGGAGC AGTTCTTCGT CGTCAACAAG GACAAGAAGA CCGACCTGCT GGGCAAACTT
TCGCCTACCA CCTTCAAGGG CGCGGAGAAT TCCGCCGCCG CCTTCGAGAG CAAATTCGCC
GCCAAGGGCC TCGGCGACTA CGTATTCGGT CTGGTGCCCG CGCCATACCT GGAAAAGTCC
GAGGACAAGT ACATCCAGCA GGTCACCAAG GCCTTCGTGA ACCAGGGCGG CGCGCCGACC
GACTGGGACA AGCCGCTGGG ACTCCCCACC GAGATCGTGC CGCTCAACAA GCCGACCGCG
ATCGTCGTCG GCTCGACCTT CTCCGGCCGC GTGCTGTCCA AAGGCAAGCC GGTTGCCGAC
GCCGAGATCG AGATCGAATA CATCGCAGCC GAGCCGGACC TAACGACTCG CACCGCCGGC
AAGCCGAGCG TCACGCCGCC GCCCGGCGGC ACGCTGATCG CCAAGACCGA CGCCAACGGC
CTCTTCACCT TCGGCATTCC CAAGGCGGGC TTCTGGGGCT TCGCCGCGCT CGGTGTCGGA
CCGTCGAAGA AATTCGACGG CAAGGAACTG TCGCAGGACG CGGTGATCTG GATCCGCGCC
AACGACCTCA AGTGA
|
|---|
| Protein sequence | MKLFKSTLAA GVFACFAAAP AESHFQLIYT PEVNLEKPAE IPLLLVFWHP FENGHVMDMA
KPEQFFVVNK DKKTDLLGKL SPTTFKGAEN SAAAFESKFA AKGLGDYVFG LVPAPYLEKS
EDKYIQQVTK AFVNQGGAPT DWDKPLGLPT EIVPLNKPTA IVVGSTFSGR VLSKGKPVAD
AEIEIEYIAA EPDLTTRTAG KPSVTPPPGG TLIAKTDANG LFTFGIPKAG FWGFAALGVG
PSKKFDGKEL SQDAVIWIRA NDLK
|
|---|
| |