Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_1956 |
Symbol | |
ID | 3973588 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 2127554 |
End bp | 2128882 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637925067 |
Product | Tat-translocated enzyme |
Protein accession | YP_531832 |
Protein GI | 90423462 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2837] Predicted iron-dependent peroxidase |
TIGRFAM ID | [TIGR01412] Tat-translocated enzyme [TIGR01413] Dyp-type peroxidase family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.351506 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAGCTC ACGATCAAGA CGCGGCCGGC TCATCAAGCG ACGCGCCGGC GTCGCCGCAA CGCCGCGGCC TGCTGCTCGG ATTGGCTGCG GGCAGCCTCG GTCTGATGCC GTCGGCTGCG CCGGCGGCCG TTACTACACC CGCCGCGGTG TCATCGCTGG TGATCCCGTT TCACGGTCCG CATCAGGCCG GGATCACAAC GCCGCAACCC TATGCCGGCC TCGTCGCCGC GTTCGATGTG CTCGCGGAGA ACCGCGAGGA GTTGCGCCAG CTCTTCATCA CACTGACGAC CCGCGCGGAA TTTCTCATGC ATGGCGGCAC GCCGCCCGAG CTCGACGAGG CGCTGCCGCC GGCCGACAGC GGCGTGTTGG GGCCCACCAT CAAACCCGAA CACCTCACCA TGACGGTCGC GGTCGGCGCT TCGTTGTTCG ACGGCCGGTT CGGCCTCGCA CCGCTGAAGC CGAAGCAGCT CGCCGAGATG GAGGACTTTC CCAACGACGC GCTCGACGCC GAGCTGTGCC ACGGCGACCT GATGATCCAG TTCTGCGCCG AGACCCCCGA AGAGGTGATT CATGCGCTGC GCGACATCGT CAAGGCGACG CCGGACCTGC TCGCGATCAA GTGGAAGCAG GAGGGCTTCG CCGCCACCCA TGGCGCGCGC AGTGGGCCGA TCGGCACCGG ACGCAATCTG CTCGGCTTCA AGGACGGCAC CGCCAACGCC GACATCCGCG ACGATGCGAT GATGAACGCC TACGTCTGGG TGCAGCCGGA TGCCGGCGAG CCGGCCTGGA GCGTCGGCGG CAGCTATCAG GTGGTGCGGC TGGTGCGCAA TTTCGTCGAG CGCTGGGATC GCACGCCGCT CAGCGAGCAG GAGGCGATCT TCGGACGCGC GCGCAATTCC GGCGCGCCGC TCGGCAAGGC CGACGAATTC GACGAGCCCG GCTACCCAGC CGACCCGAAC GGCGAGAAGA TCCCGCTGAC CTCGCATATC CGCCTCGCCA ACCCGCGGAC TCCGGAAGCA ACGGCGCGAC TGATCCGGCG CGGCTTCAAC TATTCCAACG GCGTCAGCAA ATCGGGCCAG CTCGACATGG GCCTGTTGTT CGTCTCGTTC CAATCGGATC TGGCGCAGGG CTTCATCGCC ACGCAGAACC GGCTGAACGG CGAGCCGCTC GAGGAATACA TCAAGCCGTT CGGCGGCGGT TATTACTTCG TGCTTCCGGG CGTTGCCGCG CCGGGCGGTC ATCTCGGCCA AGGCCTGTTC GCCGACGCCG CATCCCTTCC CACTCCCTCG CAACAGGCGC CCGCAAAAGC GCCCTCGAAC AAAGGCTGA
|
Protein sequence | MKAHDQDAAG SSSDAPASPQ RRGLLLGLAA GSLGLMPSAA PAAVTTPAAV SSLVIPFHGP HQAGITTPQP YAGLVAAFDV LAENREELRQ LFITLTTRAE FLMHGGTPPE LDEALPPADS GVLGPTIKPE HLTMTVAVGA SLFDGRFGLA PLKPKQLAEM EDFPNDALDA ELCHGDLMIQ FCAETPEEVI HALRDIVKAT PDLLAIKWKQ EGFAATHGAR SGPIGTGRNL LGFKDGTANA DIRDDAMMNA YVWVQPDAGE PAWSVGGSYQ VVRLVRNFVE RWDRTPLSEQ EAIFGRARNS GAPLGKADEF DEPGYPADPN GEKIPLTSHI RLANPRTPEA TARLIRRGFN YSNGVSKSGQ LDMGLLFVSF QSDLAQGFIA TQNRLNGEPL EEYIKPFGGG YYFVLPGVAA PGGHLGQGLF ADAASLPTPS QQAPAKAPSN KG
|
| |