| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1955 |
|---|
| Symbol | |
|---|
| ID | 3973587 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | + |
|---|
| Start bp | 2126443 |
|---|
| End bp | 2127540 |
|---|
| Gene Length | 1098 bp |
|---|
| Protein Length | 365 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637925066 |
|---|
| Product | putative lipoprotein |
|---|
| Protein accession | YP_531831 |
|---|
| Protein GI | 90423461 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2822] Predicted periplasmic lipoprotein involved in iron transport |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0906256 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGTTGA AGCCGATCCC CGAACCGAAG CATCTGGCTG GATCGCTTGG CATGGTGCTC
GCCCTGTTGA TCGTTGCGAC GCCAAGCCTC GCGGCCGAGG CGCCATTCGG CCCGGTCGCC
GTCGTGGTCA CCGCCAAGGC CTGTGAGCCC AACGAGCTCA AGGTGCCGGC GGGCCTCGTC
ACCTTTCAGA TCACCAACCG CTCCAGCCGC GCGCTGGAAT GGGAGATCCT GAAGGGCGTC
ATGGTGATCG ACGAGCGCGA GAACATCGCG CCGGGCTTTC GCCAGAAGAT GACCACGCGG
CTCGAGCCCG GCGAATATGA AATCACCTGC GGGCTGCTCG ACAATCCGCG CGGACGGCTG
ATCGTGGTCA ATGCCGCCGG CACCACCGCC GCCAATGTGC AGAAGCCCAG CGCGACCGAG
CTGATCGGCC CGGTCGCGGA GTATCGGGTG TGGCTGGCGG GCGAATTGAG TGCTCTCGAT
GCGGCGGCGC GGTCATTCGG TGTGGCCGTC TCGGCGGGCG ATGTTGCCGC CGCCAAGGCG
CGCTGGCGCG AGGTTCGTGC CGGAGTCCTG CGGGTCGCGC CGATTGAGCC GTTGATCGCG
GCCGAGGCGA AGGCGGTCGA TGTCGATCTC ACCGCACTGG GGGCCGCGAT CTTCGACCGC
AACACCATCG AGGGACTGGC GCAGCCGGCG ACGACGCTGA TCACCGACGT CGAGGCTTTC
CGCCGCGCGG CGCGCGCGCT GACGCCGACC CCGGAGCGCT TGATCGCCGG CGCCATCAGC
GTGGCGAAGA CGCTTGCGGA CCGTCTCGGC GAAGCGGCGC CACAACGGCC GCTGGATCTT
GCCGAGGCCG AGGCTCGCCT GCGCGGCGCG ATCCGCGTCG TCGAGCTGTT CGGCCCGCTG
ACGGAGCGCG CCGACAGCGC CGCCGCAGCC GAGCTGAGGG CCGCTGCCGC GGGCTTGCGT
GAGGCGTTGG CCAAGGCGGG CAGGGCAGCC GGCGTCGAAA CCCGCCCGGC GGGCGACGAC
GATCGCCGCG TCGTGGCTGC GGCCGCCGAC AGTTTCGCCC GCAGCAGCGC GCGATTGCCC
GCGATCCTGG GGCTGTGA
|
|---|
| Protein sequence | MSLKPIPEPK HLAGSLGMVL ALLIVATPSL AAEAPFGPVA VVVTAKACEP NELKVPAGLV
TFQITNRSSR ALEWEILKGV MVIDERENIA PGFRQKMTTR LEPGEYEITC GLLDNPRGRL
IVVNAAGTTA ANVQKPSATE LIGPVAEYRV WLAGELSALD AAARSFGVAV SAGDVAAAKA
RWREVRAGVL RVAPIEPLIA AEAKAVDVDL TALGAAIFDR NTIEGLAQPA TTLITDVEAF
RRAARALTPT PERLIAGAIS VAKTLADRLG EAAPQRPLDL AEAEARLRGA IRVVELFGPL
TERADSAAAA ELRAAAAGLR EALAKAGRAA GVETRPAGDD DRRVVAAAAD SFARSSARLP
AILGL
|
|---|
| |