| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1953 |
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| Symbol | |
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| ID | 3973585 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 2124481 |
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| End bp | 2124984 |
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| Gene Length | 504 bp |
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| Protein Length | 167 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637925064 |
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| Product | nickel responsive regulator |
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| Protein accession | YP_531829 |
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| Protein GI | 90423459 |
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| COG category | [K] Transcription |
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| COG ID | [COG0864] Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain |
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| TIGRFAM ID | [TIGR02793] nickel-responsive transcriptional regulator NikR |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.414583 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACGGG TAACGGTTTC GCTCGACGAC GATCTGCTGG AGCAGTTCGA CGGGTTCATT
CGCCGCAAGG GCTATATGAA CCGATCCGAG GCGGTGCGCG ACGTGTTGCG CGACCGGCTG
CAGGAAGACC GGCTGTCGGA AAACAACGCC CCGCTGTGCG TGGCCTGCCT CAGCTATGTC
TACAACCACC ACGAACGCGA ACTGGCGCGG CGGATCGCTG AGATCCAGCA CGCCCACCAC
GACCTGATCC GCTCGACCAT GCACGTTCAT CTCGACCACG ACAGCTGTCT GGAAGTGTCG
ATGATGGAGG GACCGACGAT CGCGGTGCGC GAACTCGCCG ACGCCCTGAT GGCACAAACC
GGTGTTCGTC ACGGCCGGGT CAATGTGGTC CCCGTCGATG TGACGGTGAC GTCGCATACT
CATGGCCATC GCGGTCATCA TCATGACCAC GGCGACGAGA CAGCCAAGCC CGCTCCGCAC
TTCCATACCA GCCCGAAAAC CTAA
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| Protein sequence | MERVTVSLDD DLLEQFDGFI RRKGYMNRSE AVRDVLRDRL QEDRLSENNA PLCVACLSYV
YNHHERELAR RIAEIQHAHH DLIRSTMHVH LDHDSCLEVS MMEGPTIAVR ELADALMAQT
GVRHGRVNVV PVDVTVTSHT HGHRGHHHDH GDETAKPAPH FHTSPKT
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