| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1946 |
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| Symbol | |
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| ID | 3973578 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 2118564 |
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| End bp | 2119799 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637925057 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_531822 |
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| Protein GI | 90423452 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.939983 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCACA CGTCGAAATT CGCCGATATC GCCCTCTTGA TCGGCTTCGC AATCGTGGTG
GCGCTCGGGC CGGTGATCTT CACCCCGATC GGCGCCGGCT ATCCCGACCT GCTGCAGAAG
TTCGCGATCT ACGGCGTCTT CGCGATCGGC TTTAACATCC TGTTCGGTCT CACCGGCTAT
CTGTCGTTCG GCCACGCCGC GTTTCTCGGG GTCGGCTCCT ACGCCGCGGT GTGGTCGTTC
AAGCTGGTGT CGATGGACCT GTTGCCGGCG GTGGCGTTCT CGGTCGTCCT CGCGGGCGTG
CTGGCGCTGG CGATCGGATT CATCAGCCTG CGGCGCTCCG GCATCTACTT CTCGATCCTG
ACGCTGGCGT TTGCGCAGAT GTGCTACAAC ATGGCGTATT CGGTGCTGAC GCCGATCACC
AATGGCGAGA CCGGATTGCG CGTGCTGCGT CAGGATCCAC GCCATCTCGA CGCCATGTTC
GGTTACGTGT CGCCGACGCC GTCGCTGCTC GGCCTGCCGA TCACCGGCTG GACCGGCTTC
TACATTTGCG GCGCGGTGCT GGTCGCGGCG TTCGGCCTGT CGATCGCAAT CTTCCGTTCG
CCGTTCGGCA TGACGCTGCG CGCCATCAAG TCGAACCAGA ACCGAATGGG CTACACCGGC
TATCATACGC GGCCGTATCT GCTGTCCGCC TTCGTGATCT CGGGCATGTT CGCCGGCCTG
GCCGGCTCCT TGCTGGCGGC GACCGATCCG TTGGTCGGCG CCGAGCGCAT GCAATGGACC
GCCTCGGGCG AAGTGGTGCT GATGACGATT CTCGGCGGCG CCGGAACGCT GCTCGGCCCG
GTGCTCGGCA CCGGCCTGAT CAAGTATTTC GAGAACATCT TCTCGGCCTA CAACGAGCCG
CAACTCACAG CCGTGTTTGC CTTCTTGCCG GACGGAGTCC GCGAGTTGGT GGTCAAGACG
GCCGGGCTGT TCGTGGGCGA AGGCTGGCAG CTCACGTTGG GCCTGTTGTT CATGGCGGTG
GTGATCTTCC TGCCCGGCGG CATCATGGAA GGCATCAACC GGCTGCTCGG CTTCAAGCAT
ACGCCGAGGG TCAAGTCGCT CGGCGACTCG CCGCAGCGCG ATGCCCTCGG TGAGAGCGTG
ATCGAGGAGA TGCCGTCGAG CCACGGCGCG GCGGCGGCGG AAAAGAAGGT CGCCGAGCAC
GAGACTGCCG AGAAGAAGAG GGCCGTTGCG CCATGA
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| Protein sequence | MKHTSKFADI ALLIGFAIVV ALGPVIFTPI GAGYPDLLQK FAIYGVFAIG FNILFGLTGY
LSFGHAAFLG VGSYAAVWSF KLVSMDLLPA VAFSVVLAGV LALAIGFISL RRSGIYFSIL
TLAFAQMCYN MAYSVLTPIT NGETGLRVLR QDPRHLDAMF GYVSPTPSLL GLPITGWTGF
YICGAVLVAA FGLSIAIFRS PFGMTLRAIK SNQNRMGYTG YHTRPYLLSA FVISGMFAGL
AGSLLAATDP LVGAERMQWT ASGEVVLMTI LGGAGTLLGP VLGTGLIKYF ENIFSAYNEP
QLTAVFAFLP DGVRELVVKT AGLFVGEGWQ LTLGLLFMAV VIFLPGGIME GINRLLGFKH
TPRVKSLGDS PQRDALGESV IEEMPSSHGA AAAEKKVAEH ETAEKKRAVA P
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