Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_1944 |
Symbol | |
ID | 3973576 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 2115975 |
End bp | 2117327 |
Gene Length | 1353 bp |
Protein Length | 450 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637925055 |
Product | twin-arginine translocation pathway signal |
Protein accession | YP_531820 |
Protein GI | 90423450 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCGACA ATAAGCTCAT CATCACTCGC AGAACCGCGC TCAAGACCGG GCTTGCCGGC GCAGCCGCGC TGGCGACACC GACGTTCTTC ATTCGCGACG CCTGGGCGGA TGAATTCTGC AATATGCCGA AGGGCAAGGA AGTCACGTTC GGCTTCAACG TGCCGCAGTC CGGTGCGTAT GCAGACGAAG GCATGGACGA ACTCAAGGCC TACCAGCTAG CGGTCAAGCA TCTCAATGGT GAGGGCGACG GCGGCATGCT CAAGACCATG AAGCCGCTGG CGCTGAAGGG CAACGGCGTG CTCGGCAAGA AGGTCGCCTA CGTCTCCGGC GACACCCAGA CCAAGGCGGA CCAGGCGCGC GCCACCGCCA AGCGCATGAT CGAGAAAGAC GGCGCGATCA TGATCACCGG CGGCTCGTCG TCTGCCGAGG CGGTCGCGGT GCAGTCGCTG TGTCAGGACG TCGGCGTGAT CTTCATGGCC GGCCTGACCC ATTCCAACGA CACCACCGGC AAGGACAAGC GCGCCTACGG CTTCCGCCAT TTCTTCAACG CCTACATGTC GGGCGTGGCA CTCGGCCCGG TGCTCTCGGA AGCCTATGGC AAGGATCGCG CCGCTTATCA TCTGACCGCC GACTACACCT GGGGCTGGAC CCAAGAAGAG TCGATGAAGG ACGCCACCGA GAAGCAGGGC TGGAAGACCG TCAAGGCCGT TCGCACGCCG CTCGGCGCAG CCGACTTCTC GCAATACATC ACGCCGGTGC TGAATTCGGG CGCCGACGTG CTGATCTTGA ACCACTACGG CAAGGACATG ATCAATTCCT TGACCCAGGC GGTGCAGTTC GGTCTTCGCG ACAAGATGGC AAACGGCAAG AAGTTCGAGA TCGTCGTGCC GCTGTTCTCC GAACTGATGG CGCAGGGCGC CGGCGATGCG ATCAAGGGCA TCTACGGCAC CGCGAACTGG GACTGGAAGC TGGAAGACCC GGCGACCAAT GCCTTCACCA AGTCGTTCGG TGCGGCCTAC GGCACGCCGC CGTCGCAGGC GGCGCAGACC TGCTACGTTC AGGCGATCCT CTACGCCGAC GCCTGCGAGC GCGCCGGCAG CTTCAACCCG TCCGCCGTGA TCAAGGCGCT GGAGGGCTTC GAGTTCGACG GCATGGGCAA CGGCAAGACG CTGTACCGCG CCGCCGACCA TCAGTGCTTC AAGGACGTGC TGGTCGTGCA GGGCAAGGAC AAGCCCAAGG ACAAGTTCGA CCTGCTCGAG GTCCGGAAGA TCGTGCCTGC ATCGCAGGTC ACCTACGATC CGAGCATCTT CGGCGGCGAA CTCGGCTCCA AGGACGCCAA GAAGTGCGGA TAA
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Protein sequence | MVDNKLIITR RTALKTGLAG AAALATPTFF IRDAWADEFC NMPKGKEVTF GFNVPQSGAY ADEGMDELKA YQLAVKHLNG EGDGGMLKTM KPLALKGNGV LGKKVAYVSG DTQTKADQAR ATAKRMIEKD GAIMITGGSS SAEAVAVQSL CQDVGVIFMA GLTHSNDTTG KDKRAYGFRH FFNAYMSGVA LGPVLSEAYG KDRAAYHLTA DYTWGWTQEE SMKDATEKQG WKTVKAVRTP LGAADFSQYI TPVLNSGADV LILNHYGKDM INSLTQAVQF GLRDKMANGK KFEIVVPLFS ELMAQGAGDA IKGIYGTANW DWKLEDPATN AFTKSFGAAY GTPPSQAAQT CYVQAILYAD ACERAGSFNP SAVIKALEGF EFDGMGNGKT LYRAADHQCF KDVLVVQGKD KPKDKFDLLE VRKIVPASQV TYDPSIFGGE LGSKDAKKCG
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