| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1940 |
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| Symbol | |
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| ID | 3973572 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 2109082 |
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| End bp | 2110551 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637925051 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_531816 |
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| Protein GI | 90423446 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCCTT CGCCGTTGCG CCACGCGGTG AGATTTTTCG CGAGCGGAAT CGGCGGCTGC
GGTCGGCTCA GGATGATGGC GTCCCGGGCA GTTTCGCCGC TGGCGGGCCT ACTGATCTTG
TTTGCCGTCT GCGCGCCCCC CGCTTCCGCC CAAACGCCGC CGCCGCCCGG TGGGTCTGAG
GACAACGCCG TCTCCAAGTC CGTCGAGGTC GATCCGACCG CCGGCGATCG TGCGATCGCC
AACCGCATCG AACGCATCCT GCAGTCCACC AACTGGTTTG ATGGGCCCAA GGTCGCGGTG
CGGGACGGCG TGGTCTTCAT CGACGGCAAG ACGCAAACCC AGGAACACCG GCGTTGGGCC
GGCACCCTGG CGCAGAATAC CCAGGGCACC GTCGCGGTGG TCAACCGGAT CGCCGTCGAG
GCCGACGTCG GATCGACCTT CGGACGCGCC GGCGACGAGT TCGTCAGGCT GTATCGGCAG
GCAGAGCAAG CTTGGCCGTG GATCCTGCTC GCCGTCGTCA TCATCCTCGT CACCTGGCTG
GTGGCGCGTC TGGTCGGATT TCTGGCGAAC CGCTTCGTCG CGCGGCGGGT GACGTCATCG
CTGCTGCGCG CCGTGATTGT CCAGGCGTTT TCGATTCCGG TGTTTCTGCT CGGGGTGTAT
TTCGTGCTCC AGGTCGCCGG CCTGACGCGC CTCGCCATCA CGGTGCTCGG CGGCACCGGG
CTGTTCGGCA TCATCGTCGG TTTCGCGTTT CGCGAGATCG CCGAAAATTT TCTCGCCAGC
ATCCTGCTCA GCGTCCGCAA CCCCTTCAGC ACCGGCGACC TGATCGAAGT CGCCGGCAAC
ACCGGGATCG TGCAAAATCT CAATGCGCGG AGCACGGTGC TGCTGACGCT GGCCGGCAAC
TACGTCCAGA TCCCGAATGC CATCGTGTTC AAGAGCACGA TCACCAATTA CAGCAGCACG
CCGAGCCGGC GCGCGACCTT CGCCATAGGA ATCAGCTACG CCGCCTCCAC CAGCAAGGCG
CAGACGCTGA TCGCGGAGGT GCTCGCGCAA CATCCCGCCG TGCTGCGCAC GCCGGAGCCG
CTGGTGCTCG TCGAGGAGCT CGGCGCCACG ACCATCAACC TGCGGGTGTA TTACTGGTTC
GCCAGCGCGA CCTATTCGCC GGCCAAGATC AATTCAGCGC TGTTGCGCCT TGTCAAAGAT
GCGCTGCTGA GCGGCGGGAT CGCGCTTACG GAATCCGCTG CCGCGGCGGC GAAAGGCGAA
CCGGTTGTCG ATGCCGACGG CGACGACGTT CGATCTCGGC ACGCGGTCGG CAAATCTGCC
GCCGACGAGG AGCGAAGTCC GTCTACGCCC GCCGAGGGCG ACCTGCGTAA CGAAACCAGT
GAGATCTGTG AGCGCTCATC CCAAGGCCGG CCGCCGGAGG CTGAGGAAAA TCTGCTCAAG
CCGCAAGCTG CTCCTCAGCG TGGCATTTGA
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| Protein sequence | MIPSPLRHAV RFFASGIGGC GRLRMMASRA VSPLAGLLIL FAVCAPPASA QTPPPPGGSE
DNAVSKSVEV DPTAGDRAIA NRIERILQST NWFDGPKVAV RDGVVFIDGK TQTQEHRRWA
GTLAQNTQGT VAVVNRIAVE ADVGSTFGRA GDEFVRLYRQ AEQAWPWILL AVVIILVTWL
VARLVGFLAN RFVARRVTSS LLRAVIVQAF SIPVFLLGVY FVLQVAGLTR LAITVLGGTG
LFGIIVGFAF REIAENFLAS ILLSVRNPFS TGDLIEVAGN TGIVQNLNAR STVLLTLAGN
YVQIPNAIVF KSTITNYSST PSRRATFAIG ISYAASTSKA QTLIAEVLAQ HPAVLRTPEP
LVLVEELGAT TINLRVYYWF ASATYSPAKI NSALLRLVKD ALLSGGIALT ESAAAAAKGE
PVVDADGDDV RSRHAVGKSA ADEERSPSTP AEGDLRNETS EICERSSQGR PPEAEENLLK
PQAAPQRGI
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