| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1938 |
|---|
| Symbol | |
|---|
| ID | 3973570 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | - |
|---|
| Start bp | 2107069 |
|---|
| End bp | 2108196 |
|---|
| Gene Length | 1128 bp |
|---|
| Protein Length | 375 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637925049 |
|---|
| Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
|---|
| Protein accession | YP_531814 |
|---|
| Protein GI | 90423444 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1252] NADH dehydrogenase, FAD-containing subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAAACA TCACCATCAT CGGCTCGGGT TTCGCCGCGC TGACCGCGGC GCGACAATTG
CGCCGGCGCA AGGTCGACGT CAGCATCACG ATGATCTCGC CGCGGCAGGA TTTGCACTTT
CTGCCCAGCG TGATCTGGAT CCCGGCGCGG TTGCGCAGCG GCGACCGGCT CAAGGTTCCA
TTGGCGCATT TCTTCCGGAA GTATCGGATC GATTTCGTTC AGGCTTCGGT CACTGGGTTG
AGAGACAACG GCCGTACGGT GGTCACCGAC CGTGGCGAAT TCAGCAACGA CCACTTGATC
GTGGCGAGCG GCGGCAAGTT CATCCGCAAA CTGCCCGGGA TCGAGCACGC CTTGATCCCA
TGCGACGGCA TCGCCGCGGG CGAGGACATC GCCAGACGGC TCGATGCGTT GAAGGGCGGC
AGCATCGCGG TGGGCTTCGC CAGCAATCCG GAAGAGCCCG GCGCGATGCG CGGCGGCCCG
ATGTTCGAAT TCTTGTTCAT CATCGACACG CTGTTACGGA AGCGCGGCCG GCGTCCCGGC
TTCCAGATCG TGTTTTTCAG CCCTGCCGTG CGGCCCGGTG CGCGGCTCGG CGAGCGCGCC
GTCGATGGCC TGCTGGCAGA GATGAAGCGC CGCGGCATCG CCACTAAGCT CGGCCGCAAG
ATCCTGCGCT TCGAACCACG CAAGGTGGTG ACGGAAAGCG ACGAGATCGA TGCCGACCTG
ATCCTGTTCA TGCCCGGGCT CACCGGGCCG GCATGGCTGG CGGATTCAGG CCTGCCGCTA
TCCGCCGGCG GCATGGTCAA GGCCGACGCG ATGTGCCGCG TCGAGGGGAT GGCCAACGTC
TGGGTCGCCG GCGACGCCGG GTCGTTTCCG GGGCCGGACT GGATGCCCAA ACAGGCCCAT
CAGGCGGATC TTCAGGCCAT CGCGGTGGCC GCCAACATCG CCGCGATCGA AGCCGGAGGC
GAGCCGTCCT ACCGCTTCAA ACCCGAATTG GTGTGCATCG TCGATACGCT GGACGCGGGG
ATGCTGGTGT TCCGCAACGA GCGCTTCAGC TTCGTCGGAC CGAAGCTGAA GATCTTCCAC
TGGCTGAAGC GGATCTTCGA ACGCCACTAC CTGACCACAT TCCGCTGA
|
|---|
| Protein sequence | MTNITIIGSG FAALTAARQL RRRKVDVSIT MISPRQDLHF LPSVIWIPAR LRSGDRLKVP
LAHFFRKYRI DFVQASVTGL RDNGRTVVTD RGEFSNDHLI VASGGKFIRK LPGIEHALIP
CDGIAAGEDI ARRLDALKGG SIAVGFASNP EEPGAMRGGP MFEFLFIIDT LLRKRGRRPG
FQIVFFSPAV RPGARLGERA VDGLLAEMKR RGIATKLGRK ILRFEPRKVV TESDEIDADL
ILFMPGLTGP AWLADSGLPL SAGGMVKADA MCRVEGMANV WVAGDAGSFP GPDWMPKQAH
QADLQAIAVA ANIAAIEAGG EPSYRFKPEL VCIVDTLDAG MLVFRNERFS FVGPKLKIFH
WLKRIFERHY LTTFR
|
|---|
| |