Gene RPC_1930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1930 
Symbol 
ID3973562 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2101782 
End bp2102150 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content64% 
IMG OID637925041 
Productcytochrome b5 
Protein accessionYP_531806 
Protein GI90423436 
COG category[C] Energy production and conversion
[I] Lipid transport and metabolism 
COG ID[COG5274] Cytochrome b involved in lipid metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCGCA AACTGTTCAT CGCAACGACT GCGACGTTCT GGGCCATGGT GCTCGCATTC 
TGGGGCGGCA GCCTGTGGTC GCCCGACGCC GAGCAGCCGC TCGCCGCAGC CCCTGACCGC
GCGATTGCCG CCGCCGAACT GGCCAAGCAC ACCACACCCG AAACCTGCTG GATGGCGATC
CGCGGCGACG TCTACGATCT CGCCGCCTAT CTGCCGGACC ATCCGTCACG GCCGCAGATC
ATCGAACCAT GGTGCGGCAA AGACGCCACC GAGGCCTACA ACACCAAGAC CAAGAACCGG
CCGCATTCCA AGGAAGCCGA CGAGATGCTA CCTAAATACC GGATTGGCCG GCTTTTGCCG
GAGCGTTAG
 
Protein sequence
MMRKLFIATT ATFWAMVLAF WGGSLWSPDA EQPLAAAPDR AIAAAELAKH TTPETCWMAI 
RGDVYDLAAY LPDHPSRPQI IEPWCGKDAT EAYNTKTKNR PHSKEADEML PKYRIGRLLP
ER