| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1926 |
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| Symbol | |
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| ID | 3973558 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 2097395 |
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| End bp | 2098132 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637925037 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_531802 |
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| Protein GI | 90423432 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTAAAC CCTTCGCCTC CCGCATTGCT CTCGTCACCG GCGCCTCGCG CGGCATCGGC
TATGCCGCCG CGCTCGCGCT GGCCGAAGCC GGCGCGCATA TCGTCGCGGT GGCGCGCACC
CAAGGCGGCC TCGAAGAGCT CGACGACGCC ATCCGCGGCA TCGGCGGCAG CGCCACGCTG
GTGCCGCTCG ATCTCACCGA TTTCGAAGCC ATCGCGCGGC TCGGCGCCGC GCTGAACGAG
CGCCACGGCA GACTCGACGT TATGGTCGCG TCAGCCGGCA TCGCCGGGCC GTCGTCGCCG
CTCGGCCACA TTCCGATGAA GCCGTGGAGC GACGTGATCG CGATCAACCT CACCGCGAAT
TTTCAATTGA TCCGCTGCAT GGAGCCGCTG CTGCGCAATT CGGACGCCGG CCGCGCCGTG
TTCCTGACCT CCGCCGCGGC TGCGGGGGCT CCTGCCTATC GCGGCCCTTA CGCGGCGTCC
CACGCGGCGC TGCAGACCTT GGCGCGGGTG TGGGCGCGCG AGACCGCGAT TACCAAGATC
AAGATCAACC TGTTCGATCC CGGCCCGACC CGCACCAAAC TGCGCGCCAC GGTGATGCCC
GGAGAAGACC CGCAGACCTT GCCGACGCCG CAGCAGGTTG CCGAGCAGAT CGTGCCGCTG
TGTGCCGCCG ACTTTGCCGA AAGCGGCAAG CTTTATGACT ACACGAGCCG CACGGTGAAG
GATTTTGCCG TGCTGTGA
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| Protein sequence | MTKPFASRIA LVTGASRGIG YAAALALAEA GAHIVAVART QGGLEELDDA IRGIGGSATL
VPLDLTDFEA IARLGAALNE RHGRLDVMVA SAGIAGPSSP LGHIPMKPWS DVIAINLTAN
FQLIRCMEPL LRNSDAGRAV FLTSAAAAGA PAYRGPYAAS HAALQTLARV WARETAITKI
KINLFDPGPT RTKLRATVMP GEDPQTLPTP QQVAEQIVPL CAADFAESGK LYDYTSRTVK
DFAVL
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