Gene RPC_1924 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1924 
Symbol 
ID3973556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2096372 
End bp2096947 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content63% 
IMG OID637925035 
Product4-hydroxybenzoyl-CoA thioesterase 
Protein accessionYP_531800 
Protein GI90423430 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID[TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family
[TIGR02799] tol-pal system-associated acyl-CoA thioesterase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGATG GAGCCCACGG CATCGATTTG CCAAAGCCTC ACGTCGCGTC GACACCGGCC 
GCGCCATCTC ACGCCCATCT CGATGGCGAG ATTTGCGATG GCGGCCATCG CATGCTGGTC
CGGGTCTATT ATGAGGACAC CGATTTTTCC GGCATCGTCT ACCACGCCAA CTATCTTCGC
TTCCTGGAAC GCGGCCGCAG CAACTATCTG CGCCTGCTCG GCGCCGATCA GCGCGCGCTG
TTTTCGGACG GCGTCGGCGA AGCGCCAGGA TACGCGTTCG TGGTGCGGGC GATGCAGCTC
GAATTTCTCA GATCCGCAAG GATGGACGAC CTGCTCGAAG TCGAGACCCG GCCGCTCGAG
GTGAAGGGCG CTTCGATCAC GATGGGGCAG CGAATTCTCC GCGATGGAAC CGTGCTGTTC
GAAGCCAAGG TCAAGGTGGC GTTCGTATCC GGCGGGCGGC CGCGCCCGAT CCCGAAAGCG
ATCCGGACCG CGATGTCGGC GGACGGTGCC GGCCCGGATT TCGCAAGCTC AAACGTCATG
GCGTCGAAAT CGATCTCTGG AGACGAGCCA TGCTGA
 
Protein sequence
MFDGAHGIDL PKPHVASTPA APSHAHLDGE ICDGGHRMLV RVYYEDTDFS GIVYHANYLR 
FLERGRSNYL RLLGADQRAL FSDGVGEAPG YAFVVRAMQL EFLRSARMDD LLEVETRPLE
VKGASITMGQ RILRDGTVLF EAKVKVAFVS GGRPRPIPKA IRTAMSADGA GPDFASSNVM
ASKSISGDEP C