Gene RPC_1912 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1912 
Symbol 
ID3973468 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2085522 
End bp2086397 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content70% 
IMG OID637925023 
Producthypothetical protein 
Protein accessionYP_531788 
Protein GI90423418 
COG category[R] General function prediction only 
COG ID[COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGCAG ATCCTGCGTC CCTGCGATCG GGATCCTCGC GCGATCTGCC TTACCGCGTG 
GCGTGGCGGG CCCGCGGCGT CCATGCCGGT GCGCATCGCG GTCGTTCCTC CGGAGCCGGC
GGCTTGTTTC GCGACCTTGC CACGCTGTTG GAGGCACCCG ATCCGCGACG GCTCGATTTG
CGCGCCAGCG TGCGCGATCC GTTCGAGCAG CTTTATGTGC GGCGCTTCGA GAAAAGCACG
GCGATCACCC TGTACGCGCT GGTCGACGTC TCGGCGTCGA TGGGTTTTGT CGGCAACATG
CGCAAGCTCG AGGTGGCGGC GGCGATCTGC GCGGCGCTGG CGTTGTCGGC GCGGCGGATC
GGCGACAGTT TCGGCGTGAT CGGCTGCGAC CGCGAGATCG TGCCGGAGCT GCATTTTCCC
GCCACGCGTT CGCGCGCCGG GGCAGCCGCC GCGGCGCTGT CGGCGTTCCG GCCAAAGCGG
CGCGGCGCCG GCGGGTTGAT CGACGCGGCG GCGCGGATTG CGGGACGGCG CAAATTGGTG
CTGCTGATCT CGGACTTCCA GATCGAAGCC GACGAATTGA GCGCCGTGTT CGAAGCCTGT
GCCGCGCACG ACACCGTTCC GGTGCAGCTG ATCGACAGCG CGGAATTGGT GAGCCTGCCA
CGCTGGGGAT TGCTGCCGCT GGCCGATCTG GAGACGGGGC AGCGTCGATT GGTGCTGTTG
CGCCCTTCGC TCAAAGCCGC CTGGGAGCGG GCGCGCGCCG AGCATGACGC CCGGCTCGAA
GCGCTGGCCG CACGCTACGC CCGGGCGCCG TTGCGGATCG TCGACCGGCT GGACTGGGAG
CGGCTCGCCG CGCATCTGAT GGAGGCGCGC GGATGA
 
Protein sequence
MMADPASLRS GSSRDLPYRV AWRARGVHAG AHRGRSSGAG GLFRDLATLL EAPDPRRLDL 
RASVRDPFEQ LYVRRFEKST AITLYALVDV SASMGFVGNM RKLEVAAAIC AALALSARRI
GDSFGVIGCD REIVPELHFP ATRSRAGAAA AALSAFRPKR RGAGGLIDAA ARIAGRRKLV
LLISDFQIEA DELSAVFEAC AAHDTVPVQL IDSAELVSLP RWGLLPLADL ETGQRRLVLL
RPSLKAAWER ARAEHDARLE ALAARYARAP LRIVDRLDWE RLAAHLMEAR G