Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_1901 |
Symbol | |
ID | 3973419 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 2072042 |
End bp | 2072647 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637925012 |
Product | TetR family transcriptional regulator |
Protein accession | YP_531777 |
Protein GI | 90423407 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.665453 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGATGG GTCGACCCCG CGCCTTCAAC GCCGACAAGG CGTTGGACGA AGCGATGGAG ATCTTCTGGC GGCACGGTTA CGAGGGCGCG ACGATCGCGC AACTCACTGA CGTCATGGGC ATAAATCCGC CGAGCCTGTA TGCGGCGTTC GGCAGCAAAG AAGGCCTGTT GCGGGCCGCG CTGGACCGTT ACACCGCCAA ACGGGCGGCC TTTCTGACGG AAATTTTACA AGCGCCGACC GCCCGCGCGG TGGCCGAAAA GCTGTTGATG GGGATCGCCG ACGTTCAGAC CGACCCCTCG CATCCGCCGG GCTGCCTGCT GGTGCAAGGC GGGCTCGCCT GCGGCAGCGG CTCGGAGAAC GTGCCGTTCG AGCTGGCGTC GCGCCGCGCC GAAACCGAGG ACCGGCTGCG GCAACGCTTT GAACAGGCCA AGGCCGAGGG CGATCTCACC GCCACCGCCG ACCCCTGCGC GCTGGCGCGC TATCTTTCGG CGGTCACCGT GGGCATGGGC GTGATGGCGT CGTCCGGCGC CGGGCGCGAG GAGCTGCGCG AGATCGCCAG CCTGTCGCTG AAGGCGTTCG AGCAGCAGGC CGCGACAGTC AGCTAG
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Protein sequence | MAMGRPRAFN ADKALDEAME IFWRHGYEGA TIAQLTDVMG INPPSLYAAF GSKEGLLRAA LDRYTAKRAA FLTEILQAPT ARAVAEKLLM GIADVQTDPS HPPGCLLVQG GLACGSGSEN VPFELASRRA ETEDRLRQRF EQAKAEGDLT ATADPCALAR YLSAVTVGMG VMASSGAGRE ELREIASLSL KAFEQQAATV S
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