Gene RPC_1898 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1898 
Symbol 
ID3973416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2069650 
End bp2070381 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content65% 
IMG OID637925009 
Producthypothetical protein 
Protein accessionYP_531774 
Protein GI90423404 
COG category[S] Function unknown 
COG ID[COG1801] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.945116 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCGGA TTTTGATCGG CACCTCGGGG TGGCACTACG CGTCCTGGCG CGGCCCGTTC 
TTTCCCGAGC GACTGCCGAT CGCCCACCAG CTGCAGTATT ACGCCAGCCA GTTCTCGACC
GCCGAACTCA ACGGCGTGTT CTATCGCACG CCGACCCGCG AGGCGGTGCA GGCTTGGCAC
AACCTGACCG GCAACGACTT CGTATTCGCC TGGAAGGCCT CGAAGTTCAT CACGCATTGG
AAGCGGCTGT CGGCGGCTTC GGCGAACAGT CTGGAGCTGA TGGAGGATCG GCTGGCGCTG
CTCGGCGCCA AGGCCGGGCC GATCCTGTTT CAACTGCCGC CGCAATTTGC CGCAGATCCG
GATCGGTTGG CCGACTTCCT GCGCATGCTG TCGAAGCGGC GCCGCTACAG CTTCGAGTTC
CGGCATCCGA GCTGGTACAC GCCCGCCGTG CTGCGGTTGT TGCGCGAGGC CAATGTGGCG
CTGTGTCTGT CCGATCACCA CGACGCACCG GCGCCTTGGA AGCGCACGGC GGATTTTGTC
TATGTGAGAG GTCACGGACC GGGCGGCCGC TACAAGGGCC GCTATCCGGC CGCAACCCTG
CAGCAATGGT CGGCACGGAT CGGCGCGTGG AAACGGCGGG GCTACGACGC CTATGTGTAC
TTCGATAACG ACCAGAAGAG TGCTGCGCCG AGCGACGCGC TGCGGCTGCG GCAACTGATC
ACGCCGCGGT GA
 
Protein sequence
MARILIGTSG WHYASWRGPF FPERLPIAHQ LQYYASQFST AELNGVFYRT PTREAVQAWH 
NLTGNDFVFA WKASKFITHW KRLSAASANS LELMEDRLAL LGAKAGPILF QLPPQFAADP
DRLADFLRML SKRRRYSFEF RHPSWYTPAV LRLLREANVA LCLSDHHDAP APWKRTADFV
YVRGHGPGGR YKGRYPAATL QQWSARIGAW KRRGYDAYVY FDNDQKSAAP SDALRLRQLI
TPR