Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_1898 |
Symbol | |
ID | 3973416 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 2069650 |
End bp | 2070381 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637925009 |
Product | hypothetical protein |
Protein accession | YP_531774 |
Protein GI | 90423404 |
COG category | [S] Function unknown |
COG ID | [COG1801] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.945116 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCGGA TTTTGATCGG CACCTCGGGG TGGCACTACG CGTCCTGGCG CGGCCCGTTC TTTCCCGAGC GACTGCCGAT CGCCCACCAG CTGCAGTATT ACGCCAGCCA GTTCTCGACC GCCGAACTCA ACGGCGTGTT CTATCGCACG CCGACCCGCG AGGCGGTGCA GGCTTGGCAC AACCTGACCG GCAACGACTT CGTATTCGCC TGGAAGGCCT CGAAGTTCAT CACGCATTGG AAGCGGCTGT CGGCGGCTTC GGCGAACAGT CTGGAGCTGA TGGAGGATCG GCTGGCGCTG CTCGGCGCCA AGGCCGGGCC GATCCTGTTT CAACTGCCGC CGCAATTTGC CGCAGATCCG GATCGGTTGG CCGACTTCCT GCGCATGCTG TCGAAGCGGC GCCGCTACAG CTTCGAGTTC CGGCATCCGA GCTGGTACAC GCCCGCCGTG CTGCGGTTGT TGCGCGAGGC CAATGTGGCG CTGTGTCTGT CCGATCACCA CGACGCACCG GCGCCTTGGA AGCGCACGGC GGATTTTGTC TATGTGAGAG GTCACGGACC GGGCGGCCGC TACAAGGGCC GCTATCCGGC CGCAACCCTG CAGCAATGGT CGGCACGGAT CGGCGCGTGG AAACGGCGGG GCTACGACGC CTATGTGTAC TTCGATAACG ACCAGAAGAG TGCTGCGCCG AGCGACGCGC TGCGGCTGCG GCAACTGATC ACGCCGCGGT GA
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Protein sequence | MARILIGTSG WHYASWRGPF FPERLPIAHQ LQYYASQFST AELNGVFYRT PTREAVQAWH NLTGNDFVFA WKASKFITHW KRLSAASANS LELMEDRLAL LGAKAGPILF QLPPQFAADP DRLADFLRML SKRRRYSFEF RHPSWYTPAV LRLLREANVA LCLSDHHDAP APWKRTADFV YVRGHGPGGR YKGRYPAATL QQWSARIGAW KRRGYDAYVY FDNDQKSAAP SDALRLRQLI TPR
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