Gene RPC_1897 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1897 
Symbol 
ID3973415 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2068680 
End bp2069417 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content66% 
IMG OID637925008 
Producthypothetical protein 
Protein accessionYP_531773 
Protein GI90423403 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.850537 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGCG TCACCTACCC GCCATTGAAC GTGCCGAAGC CGGTCGCCGA TAGCCTTTGG 
ATCGTCGACA GCGGGCCGAT GCGGCCGATG GGCCTCTCCA TCCCGGTCCG CATGACCATC
GTCCGCCTGG CCAATGGCGA CGTCTGGCTG CATTCGCCGA CGCCATGGTC TTCCGAACTC
GCGCGCGCGA TCCAGCAGAT CGGGCCGATC CGCCATCTGG TGGCGCCGAA CATCGCGCAT
TGGACGTTTG TGAAGGAGTG GCAGGACCGC TTCCCGGCGG CGGTCACCTG GGCGGCGCCG
GGGCTGCGGC GGCGCGGTGC GGTGAAGACG TCGGGTCTGC GCATCGACCA TGATCTTGGC
GCACAGCCGC CCGCGGACTG GAGCGAGGAT CTCGATCAGC GATTGCTGAC CGGCGGCTTT
GGGCTCACGG AAGTGGTGTT TCTGCACAAG CCGAGCAACA CGCTGATCGC GGTCGATCTG
GTGCAGAACT TCGAAGCAGA GAAAATATCG CCGGCGCTGC GGCCGCTGGC CCGGCTCGGT
GGCGTGGTGG CGCCGGACGG CGAGGCGCCG CCGCATTATC GCTTTGCGGT GAATCGCAAA
CGCAGCGAAG CCCAGCGGAT CGCCCGCGAA CTGGTGGATC AGTTCCGTCC CGAACGGGTG
ATCTTCGAGC ACGGGCAATG GTTCGAGCGC GACGGAACCG AACAATTGCG CACCTCGCTA
CGCTGGTTGT TGACCTGA
 
Protein sequence
MSRVTYPPLN VPKPVADSLW IVDSGPMRPM GLSIPVRMTI VRLANGDVWL HSPTPWSSEL 
ARAIQQIGPI RHLVAPNIAH WTFVKEWQDR FPAAVTWAAP GLRRRGAVKT SGLRIDHDLG
AQPPADWSED LDQRLLTGGF GLTEVVFLHK PSNTLIAVDL VQNFEAEKIS PALRPLARLG
GVVAPDGEAP PHYRFAVNRK RSEAQRIARE LVDQFRPERV IFEHGQWFER DGTEQLRTSL
RWLLT