Gene RPC_1891 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1891 
Symbol 
ID3973408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2062900 
End bp2063328 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content72% 
IMG OID637925002 
Producthypothetical protein 
Protein accessionYP_531767 
Protein GI90423397 
COG category[S] Function unknown 
COG ID[COG5469] Predicted metal-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.432746 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCATG CCGCCGAACA CGCGCCCGGC CAGCGACCAA GCCGTGACTC CGTCGATCCG 
ATGGTGACGC TGCACGTCTG CGTCAATTGC CTGGCCGGCG AGGACCGCGA CTCTCACCCG
CGCGCCGGTG CCCGGCTGTA CCAGGCGCTG CTCGAAGCGC AGCAGCGTCA GGATCAGCCG
CCCGAGGTGC ACATCGCCGC CGCCGAGTGC CTGTCGAACT GCAATCGCGG CTGCAGCGCG
GCGCTGTGCG GCGCCGGGCG CTGGAGCTAC GTCTATGGCG ATCTCACCGA GGCCGCGGTC
GACGATCTGC TGGCCGGTGC CGCCCAATAC GCCGCCACCG CCGACGGCCT GGTGCCGTGG
CGCGAGCGGC CGACGATCTT CCGCAAGGGC GTGATCGCGC GAATTCCGCC CGTGCCGCGG
CCGGCCTAG
 
Protein sequence
MDHAAEHAPG QRPSRDSVDP MVTLHVCVNC LAGEDRDSHP RAGARLYQAL LEAQQRQDQP 
PEVHIAAAEC LSNCNRGCSA ALCGAGRWSY VYGDLTEAAV DDLLAGAAQY AATADGLVPW
RERPTIFRKG VIARIPPVPR PA