Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_1890 |
Symbol | |
ID | 3973407 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 2061859 |
End bp | 2062890 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637925001 |
Product | cobalamin (vitamin B12) biosynthesis CobW |
Protein accession | YP_531766 |
Protein GI | 90423396 |
COG category | [R] General function prediction only |
COG ID | [COG0523] Putative GTPases (G3E family) |
TIGRFAM ID | [TIGR02475] cobalamin biosynthesis protein CobW |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.91966 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGATCG AAAAGATTCC CGTTACCATC ATCACCGGCT TCTTAGGCTC CGGCAAGACC ACGCTGGTGC GGCACCTGAT GCAGAATCCG CAGGGCCGCC GCCTCGCCAT CCTGGTCAAC GAATTCGGCG ACATCGGCGT CGACGGCGAG ATCTTGAAGG GCTGCGCCGA CGCCAATTGC CCGGAAGACG CCATCGTCGA ACTGACCAAC GGCTGCCTGT GCTGCACCGT GGCCGACGAT TTCGTGCCGA CGATCACCGC GCTGCTGGCG CGTCCCAATC CGCCCGATCA CATCCTGATC GAAACCTCCG GCCTGGCGCT GCCGAAGCCG CTGTTGAAGG CGTTCGAATG GCCCGACCTG CGCTCGCGCA TCACCGTCGA CGGCGTGATC GCCGTCACCG ACGCTGAAGC CGTCGCCGAC GGCCGCTTCG CCCACGATCT TGCGGCGATC GCGCGGCAGC GACAGGAAGA TACCAGCGTC GATCACGACA CCCCGCTCGG CGAAGTGTTC GAGGATCAGA TCGCCTGCGC CGACATCGTG ATCCTCAACA AGGCCGACCT GGTCGATGCG GCGCGGCTCG CCGCGGCGCG CGAAGCGGTG CAGGCGGAAT CGCCGCGCAA CATTCCGATC GTGGACGTGA TCGAAGGTCG GGTCGATCCG CGCATCGTGC TCGGCATCGG CGCCGCTGCG GAAGACGATC TGGACCAGCG GCCGACCCAC CACGACAGCC ACGACGCCCA TGATCACGAC GATTTCGAAA CCCTGGTGAT CACGCTGCCG AGCCATGCCA GCGCAGAGGC CGTCATCGCC GGGGTGGAGA CCATCGCCCG CGAGCACGGC GTGCTGCGCG CCAAGGGCTA CGTCGCCATA TCCGGCAAGC CGATGCGGTT GCTGGTGCAG GGCGTCGGCT CCCGGGTGCG GGCGCAATTC GACCGTCCGT GGCGCGCCGA CGAACCGCGG ACCTCGCACC TCGTGGTGAT CGGCGAGCGC GGCATCGACC GCGACGCCAT CACCGCCGTG CTGGCCGGGT GA
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Protein sequence | MSIEKIPVTI ITGFLGSGKT TLVRHLMQNP QGRRLAILVN EFGDIGVDGE ILKGCADANC PEDAIVELTN GCLCCTVADD FVPTITALLA RPNPPDHILI ETSGLALPKP LLKAFEWPDL RSRITVDGVI AVTDAEAVAD GRFAHDLAAI ARQRQEDTSV DHDTPLGEVF EDQIACADIV ILNKADLVDA ARLAAAREAV QAESPRNIPI VDVIEGRVDP RIVLGIGAAA EDDLDQRPTH HDSHDAHDHD DFETLVITLP SHASAEAVIA GVETIAREHG VLRAKGYVAI SGKPMRLLVQ GVGSRVRAQF DRPWRADEPR TSHLVVIGER GIDRDAITAV LAG
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