Gene RPC_1890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1890 
Symbol 
ID3973407 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2061859 
End bp2062890 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content67% 
IMG OID637925001 
Productcobalamin (vitamin B12) biosynthesis CobW 
Protein accessionYP_531766 
Protein GI90423396 
COG category[R] General function prediction only 
COG ID[COG0523] Putative GTPases (G3E family) 
TIGRFAM ID[TIGR02475] cobalamin biosynthesis protein CobW 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.91966 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGATCG AAAAGATTCC CGTTACCATC ATCACCGGCT TCTTAGGCTC CGGCAAGACC 
ACGCTGGTGC GGCACCTGAT GCAGAATCCG CAGGGCCGCC GCCTCGCCAT CCTGGTCAAC
GAATTCGGCG ACATCGGCGT CGACGGCGAG ATCTTGAAGG GCTGCGCCGA CGCCAATTGC
CCGGAAGACG CCATCGTCGA ACTGACCAAC GGCTGCCTGT GCTGCACCGT GGCCGACGAT
TTCGTGCCGA CGATCACCGC GCTGCTGGCG CGTCCCAATC CGCCCGATCA CATCCTGATC
GAAACCTCCG GCCTGGCGCT GCCGAAGCCG CTGTTGAAGG CGTTCGAATG GCCCGACCTG
CGCTCGCGCA TCACCGTCGA CGGCGTGATC GCCGTCACCG ACGCTGAAGC CGTCGCCGAC
GGCCGCTTCG CCCACGATCT TGCGGCGATC GCGCGGCAGC GACAGGAAGA TACCAGCGTC
GATCACGACA CCCCGCTCGG CGAAGTGTTC GAGGATCAGA TCGCCTGCGC CGACATCGTG
ATCCTCAACA AGGCCGACCT GGTCGATGCG GCGCGGCTCG CCGCGGCGCG CGAAGCGGTG
CAGGCGGAAT CGCCGCGCAA CATTCCGATC GTGGACGTGA TCGAAGGTCG GGTCGATCCG
CGCATCGTGC TCGGCATCGG CGCCGCTGCG GAAGACGATC TGGACCAGCG GCCGACCCAC
CACGACAGCC ACGACGCCCA TGATCACGAC GATTTCGAAA CCCTGGTGAT CACGCTGCCG
AGCCATGCCA GCGCAGAGGC CGTCATCGCC GGGGTGGAGA CCATCGCCCG CGAGCACGGC
GTGCTGCGCG CCAAGGGCTA CGTCGCCATA TCCGGCAAGC CGATGCGGTT GCTGGTGCAG
GGCGTCGGCT CCCGGGTGCG GGCGCAATTC GACCGTCCGT GGCGCGCCGA CGAACCGCGG
ACCTCGCACC TCGTGGTGAT CGGCGAGCGC GGCATCGACC GCGACGCCAT CACCGCCGTG
CTGGCCGGGT GA
 
Protein sequence
MSIEKIPVTI ITGFLGSGKT TLVRHLMQNP QGRRLAILVN EFGDIGVDGE ILKGCADANC 
PEDAIVELTN GCLCCTVADD FVPTITALLA RPNPPDHILI ETSGLALPKP LLKAFEWPDL
RSRITVDGVI AVTDAEAVAD GRFAHDLAAI ARQRQEDTSV DHDTPLGEVF EDQIACADIV
ILNKADLVDA ARLAAAREAV QAESPRNIPI VDVIEGRVDP RIVLGIGAAA EDDLDQRPTH
HDSHDAHDHD DFETLVITLP SHASAEAVIA GVETIAREHG VLRAKGYVAI SGKPMRLLVQ
GVGSRVRAQF DRPWRADEPR TSHLVVIGER GIDRDAITAV LAG