Gene RPC_1887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1887 
Symbol 
ID3973404 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2057174 
End bp2057905 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content66% 
IMG OID637924998 
Productprecorrin-2 C20-methyltransferase 
Protein accessionYP_531763 
Protein GI90423393 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2243] Precorrin-2 methylase 
TIGRFAM ID[TIGR01467] precorrin-2 C20-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAGCG CAGCGACCAT CTACGGCGTC GGGCTCGGCC CCGGTGATCC CGATCTGATG 
AGCGTCAAGG CCGCGCGGCT GATCGGCCAG GCTTCCGTGA TCGCGCATTT CCGCAAGCCC
GGCCGCGCCG GCAACGCCCG CACGCTGGTC GAAGGCCTGC TGGCCCCCGG CGCGATCGAA
GTCGCGATGG AATATCCGGT GACGACCGAG ATCGCGATCG ACGACCCGGC CTATAACGAT
AGCCTGCGCG AGTTCTACGA CGACTGCGTG CAACGACTGC TAATTCACGT CGCCGAGGGG
CGCGACGTCG CGGTGCTGTG CGAGGGCGAT CCGTTCCTCT ACGGCTCGTT CATGCATCTG
CACAGCCGGC TCAAAGGCAA GGCCAACGTC GTGGTGGTGC CGGGCATTTC CGGGATGTCC
GGCTGCTGGA CCGCCAGCGG CCAACCGATC ACCTTCGGCG ACGACGTTTT GTCGGTGGTG
CCGGCGACGC TCGATGAAGC GAGCCTGCGC GACCGCTTCC AGACGATCGA CGCGCTGGTG
GTGATGAAGC TCGGCCGCAA TCTGCCGAAA GTGCGCCGTG CGCTCCAGGC CGCGGGGCTG
ATCGAGCGGG CGGTCTATGT CGAGCGCGGC ACCATGGCGG CGCAGAAAGT GATGCGACTT
GCTGAGAAGA CTGACGACGA GGCGCCCTAC TTCTCGATGA TCCTGATCCA CGGCCAGGGG
CGGCGGCCAT GA
 
Protein sequence
MSSAATIYGV GLGPGDPDLM SVKAARLIGQ ASVIAHFRKP GRAGNARTLV EGLLAPGAIE 
VAMEYPVTTE IAIDDPAYND SLREFYDDCV QRLLIHVAEG RDVAVLCEGD PFLYGSFMHL
HSRLKGKANV VVVPGISGMS GCWTASGQPI TFGDDVLSVV PATLDEASLR DRFQTIDALV
VMKLGRNLPK VRRALQAAGL IERAVYVERG TMAAQKVMRL AEKTDDEAPY FSMILIHGQG
RRP