Gene RPC_1885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1885 
Symbol 
ID3973402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp2055670 
End bp2056449 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content69% 
IMG OID637924996 
Productcobalt-precorrin-6x reductase 
Protein accessionYP_531761 
Protein GI90423391 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2099] Precorrin-6x reductase 
TIGRFAM ID[TIGR00715] precorrin-6x reductase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCCT CCACGACCAA ACTCCGCGTG CTGATCCTCG GCGGCACCGC CGACGCCAAC 
CGGCTGGCCC AGGCATTGGC CAGCGCGCAG GGCATCGACG CAGTGCTGTC CTATGCCGGG
CGCACCGACC ATCCGACGCC GCCGCCGATT GCCTGGCGCG TCGGCGGCTT CGGCGGCGTC
GACGGATTGG TCGACTACCT GCGCGCGGAA GACATCGCGC GGGTGGTCGA TGCCACGCAT
CCGTTCGCGG CGCAAATGAG CGCGCATGCG GTGGCCGCTT GCGCGCAGGC CGGCGTTCCG
TTGCTGGCGC TTGAGCGTAA GCCGTGGCAG CGGCAAAGCG GCGATCGCTG GATCGAGGTC
GACGATCTGC AGGCCGCAGC GGTTGCCTTG GGCAAGGCCC CGCGCCGGGT GTTTCTCGGC
ATCGGCCGCA TGCATCTGAA GATTTTCGCG GACTATCCGC AGCACGACTA TCTGGTGCGG
CTGGTCGATC CGCCGCGCGT GCCGCTGCCC TTGCCGGATG CGCAAGTGAT CGTGGCGCGC
GGGCCGTTCG ATCGGGCCTC CGACCGCGCC ATGCTGAGCG ACTTCCATGC CGATTGCGTC
GTCGCCAAGA ACGCCGGCGG CGACGCCGCC TCCGCCAAGA TCGAGGCGGC GCGAGATCTG
GCGCTGCCGG TGGTGATGGT GCGGCGGCCG TTTGTTCCGG CGCGGCACAG CGTCGAAACC
GTTGATGATG TGCTGCGCTG GCTCGGTCAC GTCGCCGCTC CGACCGACCG CGGCGTATAG
 
Protein sequence
MNASTTKLRV LILGGTADAN RLAQALASAQ GIDAVLSYAG RTDHPTPPPI AWRVGGFGGV 
DGLVDYLRAE DIARVVDATH PFAAQMSAHA VAACAQAGVP LLALERKPWQ RQSGDRWIEV
DDLQAAAVAL GKAPRRVFLG IGRMHLKIFA DYPQHDYLVR LVDPPRVPLP LPDAQVIVAR
GPFDRASDRA MLSDFHADCV VAKNAGGDAA SAKIEAARDL ALPVVMVRRP FVPARHSVET
VDDVLRWLGH VAAPTDRGV