| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1862 |
|---|
| Symbol | |
|---|
| ID | 3971876 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | + |
|---|
| Start bp | 2026085 |
|---|
| End bp | 2026867 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637924973 |
|---|
| Product | thioesterase |
|---|
| Protein accession | YP_531738 |
|---|
| Protein GI | 90423368 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3208] Predicted thioesterase involved in non-ribosomal peptide biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCAGCGAA ATTCCTCGGG CTGGATTCGC CGCAGCGGGC GCGATGCGCC GGCGCGGCTG
ATCTGCTTTC CCTACGCGGG CGGCAGTTGC AGTGCCTTTG GCGGATTGCA GCAACATCTG
CCGTCGATCG AGATCTGCGG CGTCCAACTG CCCGGACGGC AGGACCGCTT GGCGGAGCCG
CCGCTCGACG ATCTCGTGCC TTTGGTCGAG GCCCTGCTGA TTGCGATGCG GCCGCTGCTG
GATAAGCCGT TCGCTCTGTT CGGCTACAGC AGCGGTGCCA TTCTCGCCTT CGAACTCGCC
CACGCTCTGC GCGATGTCGC GGGTCCGGCG ATGCGTCATT TGTTCGTCGC AGCAGCCGGG
GCTCCGCAAC TCGGGCTCGA TCATCCGCGC ATCGCCGAAC TGCCGGTGCC GCAATTTCTC
GCCGAATTGA TCGCGCTCGG AGGTCTCCCG CCAGAGCTGG GCTCAGACCC TCATCTCGCG
GACCTGGTGC TGCCGATGTT GCGGGCGGAT GTCCGCTGGC ACGAGAACTA CGTCTTTCGG
CAGCGACCGT CGTTGACCAT TCCGATCACC GCGCTCGGCG GCCACGACGA TCGCTTCGTC
GATGTCGCGC GGTTGGCCCG GTGGCGGGAT CTGACCGCCG GCCCATTCGG ACTGGACCTG
TTGCCCGGCG GGCATCTGTT CATCGCCGAT CAGCACAAGA CGGTCGCCGA ACTGATCACA
CGGCGCTTCC GATGCATTCA GCCGGCGAGC AATGTCTCGC GTAACGAGGT CGTCAACCGC
TGA
|
|---|
| Protein sequence | MQRNSSGWIR RSGRDAPARL ICFPYAGGSC SAFGGLQQHL PSIEICGVQL PGRQDRLAEP
PLDDLVPLVE ALLIAMRPLL DKPFALFGYS SGAILAFELA HALRDVAGPA MRHLFVAAAG
APQLGLDHPR IAELPVPQFL AELIALGGLP PELGSDPHLA DLVLPMLRAD VRWHENYVFR
QRPSLTIPIT ALGGHDDRFV DVARLARWRD LTAGPFGLDL LPGGHLFIAD QHKTVAELIT
RRFRCIQPAS NVSRNEVVNR
|
|---|
| |