| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1856 |
|---|
| Symbol | |
|---|
| ID | 3971870 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | + |
|---|
| Start bp | 2019862 |
|---|
| End bp | 2021724 |
|---|
| Gene Length | 1863 bp |
|---|
| Protein Length | 620 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637924969 |
|---|
| Product | K+ potassium transporter |
|---|
| Protein accession | YP_531734 |
|---|
| Protein GI | 90423364 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3158] K+ transporter |
|---|
| TIGRFAM ID | [TIGR00794] potassium uptake protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAGA ACACCAAGGG CGCCGGATTG CTGATCAGCG CGATCGGCGT CGTCTATGGC
GACATCGGCA CCAGCCCGCT TTACGCGTTG AAGGAAACCT TTGCCGGCCA CCATCCGATC
GCGGTGACCC CCGACAACGT ATTCGGCGTG CTGTCGCTGG TGTTCTGGAC GGTGATGCTG
CTGGTCACGG TGAAATACGT CATCGTCATC ATGCGCGCCG ACAACCACGG CGAGGGCGGC
AGCCTGGCAT TGCTGGCGTT GGTCACCGAA CTGACCCGGG GTTATCGCGT CTACTATCCG
TTGATGCTGC TCGGCGTGAT CGCGGCGGCG CTGTTCTACG GCGACAGCAT GATCACGCCG
GCGATCTCGG TGCTCAGCGC GGTCGAGGGC CTCGAAGTGG TGACGCCGAG GCTGACGCCC
TACGTGGTGC CGATCACCGC GGTGGTGCTG ACCGGCCTGT TCATGATCCA GAAGCGCGGC
ACCGGGCTGG TCGGCAAGCT GTTCGGCCCG GTGATGTGCC TTTGGTTCTT GGTGCTGGCC
TTGCTCGGCA TCGTCAATAT CGTCGCAGCC CCGCACGTGC TGGGCGCGAT CAATCCGATT
TACGCGGCAG ACTTCATCGT CAAGCATCCG ATGATGAGCT TTTTTGCGCT GGGCTCGATC
GTGCTGGCGG TCACCGGCGG CGAGGCGCTG TACACCGACA TGGGCCATTT CGGCCGCTTC
CCGATCCGGG TGGCGTGGTT CGCGCTGGTG CTGCCGGCGC TGCTGTTGAA CTATTTCGGC
CAGGGCGCGC TGTTGCTCAG CGATCCCAGC GCGATCCAGA ATCCGTTCTT CCGGCAAGTT
CCGGAATGGA TGGTGGTGCC GATGGTCGGG CTTGCCACCT GCGCCACGGT GATCGCCTCG
CAGGCGGTGA TCTCCGGCGC CTACTCGGTG GCGCGCCAGG CGATTCAATT GGGATTGCTA
CCGCGGATGA CCATCGTCCA CACCTCCGGC GAGGAGGAGG GGCAAATCTA TATTCCGTTC
ACCAACTGGA CGCTGTACAT CGCGGTGATG GCGCTGGTGA TCGGCTTCCA GTCGTCGAGC
AATCTCGCCG CCGCCTACGG CATCGCCGTC ACCGGCACCA TGATGATCGA CACCATCCTG
GTCGCCTTCG TGATGGCGCT GATGTGGCGC TGGCATTGGA TCGCCGTGGC GGCGGTGGCG
GGCACGCTGC TGTTGGTCGA TCTCGCCTTC TTCTTCGCCA ACATCATCAA GGTGGCGCAG
GGCGGCTGGT TTCCGCTGTT CATCGGCGTG CTGTCGTTCA CGGTGTTGAC CACGTGGCGG
CGCGGCCGCG AATTGGTGCG CAATCAGGTC AAGAAACTGG CGGTGCCGCT CGACGTGGTG
ATGCGCGCGC TCGGCCCCAA CGTGTCGCGG GCGCGCGGCA CCGCGGTGTT TCTCACCGCC
GCGACCGACG GCGTGCCGCC GGCGCTATTG CACAATCTGA AGCACAACCA GACCGTTCAC
CAGCGCGTCG TGTTGGCGAC GGTGATGACC GCGGACACGC CTTACGTTCC CGACAGCGAG
CGCGTCACCA TGACCGATCT CGGCGACGGC TTCCATCGGC TGATCATCCG CTACGGCTTC
ATGCAGACCC CCGACGTGCC GGCGGCGCTG GAATTGTGCA AGGCGTTCGG TCAGGAGTTC
AACATGATGG CGACGTCGTT CTTCCTCAGT CGCGAGACTT ACGTGCCGAG CCTCAATCCC
GGCATGGCGC ATTGGCGGGA GCGGCTGTTC ACTTTCATGA CGCTGAACGC CACGCGGGCC
ACCATCTTTT TCAAGATCCC CACCGACCGG GTGGTCGAAT TGGGCACCCA GCTGGAAATC
TGA
|
|---|
| Protein sequence | MSQNTKGAGL LISAIGVVYG DIGTSPLYAL KETFAGHHPI AVTPDNVFGV LSLVFWTVML
LVTVKYVIVI MRADNHGEGG SLALLALVTE LTRGYRVYYP LMLLGVIAAA LFYGDSMITP
AISVLSAVEG LEVVTPRLTP YVVPITAVVL TGLFMIQKRG TGLVGKLFGP VMCLWFLVLA
LLGIVNIVAA PHVLGAINPI YAADFIVKHP MMSFFALGSI VLAVTGGEAL YTDMGHFGRF
PIRVAWFALV LPALLLNYFG QGALLLSDPS AIQNPFFRQV PEWMVVPMVG LATCATVIAS
QAVISGAYSV ARQAIQLGLL PRMTIVHTSG EEEGQIYIPF TNWTLYIAVM ALVIGFQSSS
NLAAAYGIAV TGTMMIDTIL VAFVMALMWR WHWIAVAAVA GTLLLVDLAF FFANIIKVAQ
GGWFPLFIGV LSFTVLTTWR RGRELVRNQV KKLAVPLDVV MRALGPNVSR ARGTAVFLTA
ATDGVPPALL HNLKHNQTVH QRVVLATVMT ADTPYVPDSE RVTMTDLGDG FHRLIIRYGF
MQTPDVPAAL ELCKAFGQEF NMMATSFFLS RETYVPSLNP GMAHWRERLF TFMTLNATRA
TIFFKIPTDR VVELGTQLEI
|
|---|
| |