| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1844 |
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| Symbol | |
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| ID | 3971724 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 2001637 |
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| End bp | 2003007 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637924957 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_531722 |
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| Protein GI | 90423352 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.674113 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.785076 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCTCA GTCAACTCTC CATCCGCACC AAGATCACCG CCGTGATCGC GTTCCTGATC
ATGGCCGTGA GCGGCGTCGG CCTGCTCGGG GTCGTCAATA TGCGGTCGAT CAACAACGAC
GCGGCGGCTA TTCAAAACGG CTGGTTGCCA AGCGTTCGTG CGCTGGGCGA ACTGCGCGCC
AGCGTCATCA CTTGCCGCAA TATCATCCGA GAACATCTGC TGTCGGACAC CGCCCAAGCC
AAGCAGGCGA TGGAAGCGTT GCTCGAAGAC AACGTCAAGA GCAACATCGA GATCCGGAGC
AGCTACGAAA GGCTCATCAA ATCCCCTACA GAGCGTGCGC TCTATGCCGA ATGGGTGCAA
CTCTGGGAAG CCTACCTCCA CGGCGTGCGA CAGGTGTTGG CCTTGTCCCG CGACGGCGGC
GACATCGCAT CTCTGGCAAC GCGCGAACTC AACTTGGACA CGGTCAATCC CATCGGCAAG
CGCGCCGATG AGATTCTGAA GGCGAGCATC GCCCTTAACA ACCAGGGGGC TGACGCAGCC
GGCAGGGAGG CCGCCGAGAC CTATCAGTCG GCGCTGACGT CGCTGGCGGC TGTTCTCTCG
CTCACGGTCG TCATCGGCAT CACCGTCGGC GGCTATTTCA TCCGCCATGT CGGCAGCGCC
ATGGCGTCGA TCATTACGCC GATGCGCGAA CTGGCTGCCG GACACCTCGG CGTGGCTGTG
CCGCATCAAG GTGAGCGCAA TGAAATTGGA GCGATGGCGG ATGCGCTACA GTTTTTCAAG
CAGGAGCTGA TCGCGAAGAA AGCGGACGAC GACGCCATGG CCGCGGAACT GCGCGATCGC
GCAAAACGCC TGGCGGTGCT GGCCACCACC GATCGCCTAA CCGGACTGTA CAACAGGCTG
AAATTCGATG AGACGTTGGC GAGCGAAATC GCGCGGGCCA AGCGCTACAA GATGCCGTTC
TCGTTGATCA TGTTCGACGT CGATCTGTTC AAGACCGTGA ATGATCGCTA CGGCCATCCG
ATCGGCGATC GCGTCTTGGT CGGACTATCC GATCTGGCGT CGAGCCATCT CCGCGAGACC
GACATGCTGG CGCGGTGGGG AGGAGAGGAA TTCGCTCTCC TGGTGACCGG CTCCAGCCGC
ATGGAAGCCT ACGTGGTCGC AGAGAAGCTG CGTACCGCGA TCGCACATGT CGCCTTCGAT
CAAGTCGGGC GCGTCAGCTG CAGCTTTGGC GTCACCGAAT ATCGCGATGG CGACATCCCG
GAACTGATGG TCGCCCGCGC CGATGGCGCG CTGTACCAGG CCAAGCTGAA CGGGCGCAAT
CGGGTGGAGC TGGCTTTGCC ATCCGAGCCC GACCTGTCGA GCGCGGCATG A
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| Protein sequence | MRLSQLSIRT KITAVIAFLI MAVSGVGLLG VVNMRSINND AAAIQNGWLP SVRALGELRA
SVITCRNIIR EHLLSDTAQA KQAMEALLED NVKSNIEIRS SYERLIKSPT ERALYAEWVQ
LWEAYLHGVR QVLALSRDGG DIASLATREL NLDTVNPIGK RADEILKASI ALNNQGADAA
GREAAETYQS ALTSLAAVLS LTVVIGITVG GYFIRHVGSA MASIITPMRE LAAGHLGVAV
PHQGERNEIG AMADALQFFK QELIAKKADD DAMAAELRDR AKRLAVLATT DRLTGLYNRL
KFDETLASEI ARAKRYKMPF SLIMFDVDLF KTVNDRYGHP IGDRVLVGLS DLASSHLRET
DMLARWGGEE FALLVTGSSR MEAYVVAEKL RTAIAHVAFD QVGRVSCSFG VTEYRDGDIP
ELMVARADGA LYQAKLNGRN RVELALPSEP DLSSAA
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