| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1842 |
|---|
| Symbol | |
|---|
| ID | 3971722 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | + |
|---|
| Start bp | 1998679 |
|---|
| End bp | 1999401 |
|---|
| Gene Length | 723 bp |
|---|
| Protein Length | 240 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637924955 |
|---|
| Product | two component transcriptional regulator |
|---|
| Protein accession | YP_531720 |
|---|
| Protein GI | 90423350 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGACAG AAAGCAATAC CGCCTTGCCC CAATCCGAAA CCGAAATGCG CCTGCTGATC
ATCGAGGATG ACCGCGAGTC CGCCGACTAT CTGGTCAAGG CGTTTCGTGA AGTCGGCCAC
GTCGCCGACC ACGCCGCCGA TGGCGAGGAG GGGCTGGCGC TGGCGGATTC CGGCGACTAC
GACGTGCTGG TGATCGACCG CATGCTGCCG AAGCGCGATG GTCTGTCGGT GATCGGCACG
CTGCGCGACA ACGGCAACCG CACCCCGGCG CTGATCCTCT CCGCGCTCGG CCAGGTCGAC
GACCGCATCA AGGGGCTGCG CGCCGGCGGC GACGACTACT TGCCGAAACC GTATGCCTTC
GCCGAGCTGC TGGCGCGGGT CGAGGTGCTG TCGCGCCGCC ATGGCGGCCC GGCGGAAGAA
ACCAGCTACA AGGTCGGCGA TCTCGAACTC GATCGGCTGT CGCATCGCGT CGCCCGCGGC
GACGAGGAAC TGACGCTGCA GCCGCGCGAA TTCCGGCTGC TCGAATATCT GATGAAACAC
GCCGGGCAGG TGGTGACGCG CACCATGCTG TTGGAGAACG TCTGGGACTA TCATTTCGAT
CCGCAGACCA ACGTGATCGA CGTCCACATC TCGCGGCTGC GTTCGAAAAT CGACAAGGGT
TTCGAGCGGC CGCTGCTGCA TACCATTCGC GGCGCCGGCT ACATGATCCG GGACGGCGGC
TAA
|
|---|
| Protein sequence | MVTESNTALP QSETEMRLLI IEDDRESADY LVKAFREVGH VADHAADGEE GLALADSGDY
DVLVIDRMLP KRDGLSVIGT LRDNGNRTPA LILSALGQVD DRIKGLRAGG DDYLPKPYAF
AELLARVEVL SRRHGGPAEE TSYKVGDLEL DRLSHRVARG DEELTLQPRE FRLLEYLMKH
AGQVVTRTML LENVWDYHFD PQTNVIDVHI SRLRSKIDKG FERPLLHTIR GAGYMIRDGG
|
|---|
| |