Gene RPC_1834 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1834 
Symbol 
ID3971714 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1989129 
End bp1990232 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content70% 
IMG OID637924947 
Producttetratricopeptide TPR_2 
Protein accessionYP_531712 
Protein GI90423342 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG4235] Cytochrome c biogenesis factor 
TIGRFAM ID[TIGR03142] cytochrome c-type biogenesis protein CcmI 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0184634 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.791476 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTTGT GGTTCGTGTT CGCGATGATG ACCGCCGCGG CGATCTTCGC GGTGGTGTGG 
CCGCTCGGCC GCAGGCCGCA GACCGCGCGC GAAGGCAGCG AAACCAACGT CTACAAGGAT
CAACTCGCGG AAATCGAGCG CGATGCCGAG GTCGGCCTGA TCGGCGGGGC TGAGGCGGAT
GCCGCCCGGG TCGAGATCAG CCGCCGCCTG CTGGGGGCCG CCGACGCCGA GCGGACGCCG
CCGGCTGCTG CCCGTACCGG CGCGCGGCGC GCGGTGTCGG TGATCGCGCT GGTCGGATTG
CCGCTCTTGG CGGTGGCGTT CTATCTGCCG CTCGGCTCGC CGCAGATAGC CGATTTTCCG
CTGGCGCAGC GCACCCGCAT GCCCAGCGCC ACCGAACCGC TCGACAATCT GGTGACCAAG
GTCGAGGCGC ATCTGGAGAA GAACCCGACC GACGCCCGCG GCTGGACCGT GCTGGCGCCG
GTGTTGTCGC GGCTGGGACG CTTCGACGAC GCCGTGCAGG CCTATCGCAA AGCGCTGACC
TATGGCCCGG ACAGCGCCGA GCGCCGCGCC GATCTCGGCG AGACCATCGC CGCGGCCGCC
GGCGGGGTGA TCACCGCCGA AGCCAAGGTG GAATTCGAAC GCGCGGTGGC GCTCGATGCC
GACGAGGTCA AGGCGCGTTA CTTCCTGGGG CTGTCCGCCG AGCAGGACGG CCGCCCGAAT
GACGCAGCCG CAATCTGGCG CGCGATGCTG GACAAGGCGC CGGCGGAGGC GCCGTGGCGG
CCTTTGGTGC AAAGCGCGCT GGCGCGGGTG ACCGGCGCCA AGATGCCGGC GCCGCCCGAT
GAGGCGGTGG CGGCGGCGCA AGGCATGAGC GAAGCCGACC GCGGCGCCAT GATCCAGGTC
ATGGTGGACC GCCTCGCAAC GCGCTTGAAA CAGAACGGTG ATGACGTCGA GGGATGGTTG
CGGCTGCTGC GTGCCTATAT GGTGCTGGGC GATCGCGACA AGGCCAAGAG CGCGATCGTC
GAGGCGCGTC AGGCGCTTGC CGGCAAGACC GAGCGGCTCA AGCAACTCGA CGCCGGCGTA
AAAACACTCG GACTGGATGG GTAA
 
Protein sequence
MTLWFVFAMM TAAAIFAVVW PLGRRPQTAR EGSETNVYKD QLAEIERDAE VGLIGGAEAD 
AARVEISRRL LGAADAERTP PAAARTGARR AVSVIALVGL PLLAVAFYLP LGSPQIADFP
LAQRTRMPSA TEPLDNLVTK VEAHLEKNPT DARGWTVLAP VLSRLGRFDD AVQAYRKALT
YGPDSAERRA DLGETIAAAA GGVITAEAKV EFERAVALDA DEVKARYFLG LSAEQDGRPN
DAAAIWRAML DKAPAEAPWR PLVQSALARV TGAKMPAPPD EAVAAAQGMS EADRGAMIQV
MVDRLATRLK QNGDDVEGWL RLLRAYMVLG DRDKAKSAIV EARQALAGKT ERLKQLDAGV
KTLGLDG