Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_1834 |
Symbol | |
ID | 3971714 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 1989129 |
End bp | 1990232 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637924947 |
Product | tetratricopeptide TPR_2 |
Protein accession | YP_531712 |
Protein GI | 90423342 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG4235] Cytochrome c biogenesis factor |
TIGRFAM ID | [TIGR03142] cytochrome c-type biogenesis protein CcmI |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0184634 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.791476 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGTTGT GGTTCGTGTT CGCGATGATG ACCGCCGCGG CGATCTTCGC GGTGGTGTGG CCGCTCGGCC GCAGGCCGCA GACCGCGCGC GAAGGCAGCG AAACCAACGT CTACAAGGAT CAACTCGCGG AAATCGAGCG CGATGCCGAG GTCGGCCTGA TCGGCGGGGC TGAGGCGGAT GCCGCCCGGG TCGAGATCAG CCGCCGCCTG CTGGGGGCCG CCGACGCCGA GCGGACGCCG CCGGCTGCTG CCCGTACCGG CGCGCGGCGC GCGGTGTCGG TGATCGCGCT GGTCGGATTG CCGCTCTTGG CGGTGGCGTT CTATCTGCCG CTCGGCTCGC CGCAGATAGC CGATTTTCCG CTGGCGCAGC GCACCCGCAT GCCCAGCGCC ACCGAACCGC TCGACAATCT GGTGACCAAG GTCGAGGCGC ATCTGGAGAA GAACCCGACC GACGCCCGCG GCTGGACCGT GCTGGCGCCG GTGTTGTCGC GGCTGGGACG CTTCGACGAC GCCGTGCAGG CCTATCGCAA AGCGCTGACC TATGGCCCGG ACAGCGCCGA GCGCCGCGCC GATCTCGGCG AGACCATCGC CGCGGCCGCC GGCGGGGTGA TCACCGCCGA AGCCAAGGTG GAATTCGAAC GCGCGGTGGC GCTCGATGCC GACGAGGTCA AGGCGCGTTA CTTCCTGGGG CTGTCCGCCG AGCAGGACGG CCGCCCGAAT GACGCAGCCG CAATCTGGCG CGCGATGCTG GACAAGGCGC CGGCGGAGGC GCCGTGGCGG CCTTTGGTGC AAAGCGCGCT GGCGCGGGTG ACCGGCGCCA AGATGCCGGC GCCGCCCGAT GAGGCGGTGG CGGCGGCGCA AGGCATGAGC GAAGCCGACC GCGGCGCCAT GATCCAGGTC ATGGTGGACC GCCTCGCAAC GCGCTTGAAA CAGAACGGTG ATGACGTCGA GGGATGGTTG CGGCTGCTGC GTGCCTATAT GGTGCTGGGC GATCGCGACA AGGCCAAGAG CGCGATCGTC GAGGCGCGTC AGGCGCTTGC CGGCAAGACC GAGCGGCTCA AGCAACTCGA CGCCGGCGTA AAAACACTCG GACTGGATGG GTAA
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Protein sequence | MTLWFVFAMM TAAAIFAVVW PLGRRPQTAR EGSETNVYKD QLAEIERDAE VGLIGGAEAD AARVEISRRL LGAADAERTP PAAARTGARR AVSVIALVGL PLLAVAFYLP LGSPQIADFP LAQRTRMPSA TEPLDNLVTK VEAHLEKNPT DARGWTVLAP VLSRLGRFDD AVQAYRKALT YGPDSAERRA DLGETIAAAA GGVITAEAKV EFERAVALDA DEVKARYFLG LSAEQDGRPN DAAAIWRAML DKAPAEAPWR PLVQSALARV TGAKMPAPPD EAVAAAQGMS EADRGAMIQV MVDRLATRLK QNGDDVEGWL RLLRAYMVLG DRDKAKSAIV EARQALAGKT ERLKQLDAGV KTLGLDG
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