| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1820 |
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| Symbol | |
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| ID | 3971815 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 1971218 |
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| End bp | 1971805 |
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| Gene Length | 588 bp |
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| Protein Length | 195 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637924933 |
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| Product | gene transfer agent (GTA) like protein |
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| Protein accession | YP_531698 |
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| Protein GI | 90423328 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5281] Phage-related minor tail protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.299627 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.353645 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCGACA CCACTGATAA CAGTCTGCTC GACACCGCGA CCACGCTGGA CAGCCTCGCG
CTGAAGACCC GCGACCTTTC GAGTTCCGCC GACGGCTTTG CCCGGGCGAT GACGGCGGCG
TTTTCCAGCT CGGTCACCGG CGGCAAGCAG TTCGACGAGG TCTTGAAGTC GCTCGGGCTG
CGGATCTCCA ACCTAGCGGT GCGGATGGCG TTCAAGCCGC TCGAAGGCGC GCTCTCGAAC
GGGCTGCAGA GCTTGATATC CGGGTTGAGC AACATCGGCG CGGCTCCGTC GGCGCAGGCC
AACGCGGTCG GGGCGATCAA ACCGTTCGCC GCGGGCGGGG TGATCGGCAC GCCGAGCTAC
TTCCCGATGC TGGGCGGCGG CATTGGCCTC GCCGGCGAGG CCGGGCCCGA AGCGATCATG
CCGCTGGCGC GCGGGCCGGA CGGCCGGCTC GGCGTGGCGA GCCAAGGTGG CGGCAACAGC
ATCACCGTGC AGATCGCGAC GCCCGACGTC GACAGCTTCC GCCGCTCGGA AAGCTACATC
ACCGGGCAGA TCGCCCGCGC GGTGTCGCGC GGCCAGCGCG GGCTGTGA
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| Protein sequence | MTDTTDNSLL DTATTLDSLA LKTRDLSSSA DGFARAMTAA FSSSVTGGKQ FDEVLKSLGL
RISNLAVRMA FKPLEGALSN GLQSLISGLS NIGAAPSAQA NAVGAIKPFA AGGVIGTPSY
FPMLGGGIGL AGEAGPEAIM PLARGPDGRL GVASQGGGNS ITVQIATPDV DSFRRSESYI
TGQIARAVSR GQRGL
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