| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1785 |
|---|
| Symbol | |
|---|
| ID | 3972224 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | - |
|---|
| Start bp | 1938164 |
|---|
| End bp | 1938742 |
|---|
| Gene Length | 579 bp |
|---|
| Protein Length | 192 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637924898 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_531663 |
|---|
| Protein GI | 90423293 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5436] Predicted integral membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.127834 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.068987 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCGGA TCCTGTTCAC CCTGGTCGGC GGCGTGGTGC TGGGCGCGAT CGTGCATCTG
GTCAGCGTGT TGGCGCTGCC GCGGATCGCC ACCCAGGACG CCTATTCGCG GCTGACGCCG
ATGACCAAGC TCAACGCCGT CACGCCGTTG CCGGCGCCGG AGCCGAACAA CGCGCCGATG
CCCTATCTCG ACCCGGCATT CGCCACCGCG ATCTGCCGCT ACGACCTGTC GAGCGGCCCG
ATCAAGCTCG CCGTGCCGGT CAGCCAGTCC TATACCTCGG TGTCGTTCTA CACCCGCGGC
GAAATCGCCT ACTATGCGAT CAACGACCGC TCGGCGGGGC GCCGGGTGAT CGAGCTCGAC
CTGATGACCG AAGCCCAGCA CGCCGAATTG CCGGAAGAAG AAGACGTCAC TTCGGCGGAC
CGGCTGATCA TCGATTCACC GAGCGCCACC GGGTTGATTG TGCTGAAGGC GTTGGCCGCG
GAGCCCGGCT TGATGCCGCA GGCGCAGGCC TCGCTCGCCG CAGCAAGCTG CAAGGTGCAG
ACCGAGCCGG TGGCGACCGC GCAACGGCCG AGGAAATAA
|
|---|
| Protein sequence | MIRILFTLVG GVVLGAIVHL VSVLALPRIA TQDAYSRLTP MTKLNAVTPL PAPEPNNAPM
PYLDPAFATA ICRYDLSSGP IKLAVPVSQS YTSVSFYTRG EIAYYAINDR SAGRRVIELD
LMTEAQHAEL PEEEDVTSAD RLIIDSPSAT GLIVLKALAA EPGLMPQAQA SLAAASCKVQ
TEPVATAQRP RK
|
|---|
| |