Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_1784 |
Symbol | |
ID | 3972223 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 1937324 |
End bp | 1938106 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637924897 |
Product | hypothetical protein |
Protein accession | YP_531662 |
Protein GI | 90423292 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.124772 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0720334 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCAGGC CGCGATCCGC GATGGCTGTG AGTTCCAAAG GCGTGGCGTT ACGGTTGCTG ACGGGAGCGT TGTTGACGGC GACGTTGTGC GGCTGCAGCG GCGGCGATTT CGGCCGCACC CGCGAAGACA TGCGCAGCGA CGATATGCAT CGTTGGCTTG GCACCGAAGT CACCGGCAGC GTCGGGCTGC GCGCCTCCGA ATTCCAATTG ACCGACAACG AACGGTCGCT GCGCGACTTC GCCTATCCGT TGATCGAGCC GCCGCATTCG CGCCCGGCCT GGAAGAGCGT GTTCGGCGAC TACAGTGCGA TCGCCTCGCC GTGGCGGCAG ACCCCGGTGT TCGACCGCAC CGCCTATGGC CGGATGCTGA TCGACGAGCC GCATCGTTCG CACACCTCGC GCTACGCCCA ACTGATGGAC GACGTGCGCA ACGATCTGTT GCGGCTCGAC CCGTTCCAAT CCAGCGGCGC CAAGGTCGTC GAGCTCGACA AGAAGCGCAA CGCCAGCCTG AAATTCATCT CCGACCTGTC GGCGCGCGAG CGCGCCGACG CGGTGGCGCG GATGGAAGAG AACGCGCTGA TCGTGCAGTG GGTGCAGCAA TCCCTGCATC GCCGGGTGGC GTCGTATCGC TGGGCGCTGG AGCGGCTGGT GCTGCAGGCC CCCGATGGTC TCGCCGCCGA CGCCGATCGG CTGATCAACG AACTCGAGGC CAATGCCAAC GCGCCGTCGG CGTGGGGGCC GCAGCAGCGC GGCGTCGGCG TGGCGCTCAG CGTGCGCGGC TGA
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Protein sequence | MFRPRSAMAV SSKGVALRLL TGALLTATLC GCSGGDFGRT REDMRSDDMH RWLGTEVTGS VGLRASEFQL TDNERSLRDF AYPLIEPPHS RPAWKSVFGD YSAIASPWRQ TPVFDRTAYG RMLIDEPHRS HTSRYAQLMD DVRNDLLRLD PFQSSGAKVV ELDKKRNASL KFISDLSARE RADAVARMEE NALIVQWVQQ SLHRRVASYR WALERLVLQA PDGLAADADR LINELEANAN APSAWGPQQR GVGVALSVRG
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