Gene RPC_1777 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_1777 
Symbol 
ID3972216 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp1930776 
End bp1931270 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content65% 
IMG OID637924890 
ProductFe-S metabolism associated SufE 
Protein accessionYP_531655 
Protein GI90423285 
COG category[R] General function prediction only 
COG ID[COG2166] SufE protein probably involved in Fe-S center assembly 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0862185 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.039925 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGCGC GCGCTGTGGC TCAGCTGCGG AACGGCGAGC GGCCGCAGCT GAATGGACAC 
GACGCGATGA CGATCGACGA GATCCGAGAG AATTTCGCAC TGCTCGATGA ATGGGACGAC
CGCTATCGCT ACGTCATCGA ACTCGGCCGC ATGCTGCAGC CGATGCCGGA ATCCGAACAC
AACGCCGCCA ACAAAGTCTC CGGCTGCGCC AGCCAAGTCT GGCTGTCGCG CAAGCTCGAG
CGCGACGCCA ATGGCGAACC GAAGCTCAGC TACCTCGGCG ACAGCGACGC GCATATCGTG
CGCGGCCTGA TCGCGATTCT GCTGACGCTG GTGTCGGGTC GCTCGCCGCA GGATATCCTC
GCCGCCGAGC CGCTCGCGGT GTTCGACGAA CTCGGCTTCC GCGAACATCT GACGCCGCAA
CGCTCCAACG GATTGCGTTC GATGGTCGAG CGGATCCGCC ACGACGCCCG CGACACCCTC
GCCGCCTCCA CCTGA
 
Protein sequence
MLARAVAQLR NGERPQLNGH DAMTIDEIRE NFALLDEWDD RYRYVIELGR MLQPMPESEH 
NAANKVSGCA SQVWLSRKLE RDANGEPKLS YLGDSDAHIV RGLIAILLTL VSGRSPQDIL
AAEPLAVFDE LGFREHLTPQ RSNGLRSMVE RIRHDARDTL AAST