Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_1776 |
Symbol | |
ID | 3972215 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 1930134 |
End bp | 1930775 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 637924889 |
Product | hypothetical protein |
Protein accession | YP_531654 |
Protein GI | 90423284 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0182975 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0433353 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGGACC GCAACCGCAA GCCCGCGCGC CACGCCGCCG AGGCCGCGCG GTCCGCTGCG ACAGCGGAGG CCGGCGAGGC GATCGACGGC TTTCGCGCCC GGCATCTGGA ACTGGCGCGC CGCGAGGTGA TGACCGCAGC GGGGTTGTCC AAGGTGACGG TGAACGACGG CGAGAGCCCG CTGGCCTGGC TCGCCCGCCG CAAGGGCCGC GACGGCCGCG CCATGATCAC GCCGACGCAA TTCATCGCCG GCGAAAAGCT GCGCGCCGAT TTCACCCGCG GGCAATTGAC GCCGCGGGTG ACATCGAACT GGGATGCGCC GAGCGGACGG CAGCGTGCCG CGGGCGGCGG CGGCGGCGAG ATGACCGATG TGGTGATCGC GTCGCGGCAG CGGCTGCGCG CGGCGCTGCA GGCTTGCGGG CCGGAATTCG CCGGGCTGCT GATGGACGTG TGCTGTTTTC TGCGCGGCCT CGAAGAGGTC GAGAGCCAAC GTGGCTGGCC GTCGCGCTCA GCCAAGGTGG TGCTGCAACT GGCGCTGGAT CGGCTGGCGC GGCACTACGG CCTCGACGAC CAGGCCACCG GCGCCGCCGC GGCGCGGCTG CGCAGTTGGA TGGCCGACGA CGCCGGTTTC AGCGCCGGCT GA
|
Protein sequence | MTDRNRKPAR HAAEAARSAA TAEAGEAIDG FRARHLELAR REVMTAAGLS KVTVNDGESP LAWLARRKGR DGRAMITPTQ FIAGEKLRAD FTRGQLTPRV TSNWDAPSGR QRAAGGGGGE MTDVVIASRQ RLRAALQACG PEFAGLLMDV CCFLRGLEEV ESQRGWPSRS AKVVLQLALD RLARHYGLDD QATGAAAARL RSWMADDAGF SAG
|
| |