| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1770 |
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| Symbol | |
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| ID | 3972209 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 1922712 |
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| End bp | 1924280 |
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| Gene Length | 1569 bp |
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| Protein Length | 522 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637924883 |
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| Product | cytidine/deoxycytidylate deaminase, zinc-binding region |
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| Protein accession | YP_531648 |
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| Protein GI | 90423278 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG2131] Deoxycytidylate deaminase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00425829 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.115514 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTGTAA AAAGGATCGC TCATCCAGAG CTGTTTTTCG GACTGGTGGC GCCAGTTGGC
GTCGATCTCG ATATGATCAT GGAGGTTCTG AGTACTGAAC TTACGCTTCA GAAATACAGC
GCCTTTCCTA TTCATATTAC CGAAATCATG CAAGACGTTC CGTCTAACCT CGTTTTAAAG
AATGAGACCT ATCTAGATAG AATAAATTCC CGCATCGAAT ACGCTGATGA GATTTGCAGT
CGAATTGAAC GAGAAGATGC TCTGGCCGCG ATCGCAATCA CCGCAATTCA ATCGGTCAGA
GAAAGATTGA ATCGGGAACT TGCAGAGAGA GCCGCCGAGA AACTGCCCTC TGATGCTAGG
CTTCTCCAAG AACGTTTGCA GCTACCGATT CCAAAACAAG CCTATCTTAT CAGGCAGTTC
AAACGGCCGA AAGAGATTGG GCTGTTAAGG CAGGTATACG GAAAGCTGTT TTTCCAGATA
TCCGCATATA GTTCGCCAGC GGAGCGAGAA TTGCTTTTGA AGAAAAAAAT TAAAGCGTCC
AATTTCGGAG GACTCGAAGA TAGTGAGGCT GAATGTCAAG CCATCTCCCT GATGGCGAAA
GACTATCAGG AGGCCGATAA GCCTTACGGG CAGCAAATTC GCGAAACTTT CCCCCTTGGA
GACGTCTTCG TTGATGGGGT GAACCGAAAG AACTGCGAGG CGATGATCAA GAGATTTGTC
AATCTGATTT TTGGAGATAA TTCTCTGACG CCAGACCATC ACGAATACGG GATGTATCTT
GCGAAGTCAG CTGCCCTCAG ATCAGGCGAC CTGTCCCGCC AAGTTGGTGC GGCGATCTTC
AGGGCAAGCG GAGAGGTTGC CACCCTTGGA TGCAATGAAG TTCCAAAGTA TGGGGGAGGT
AGTTACTGGT CCGACGGATC AGAGGATCGT CGAGACTTTG CCTTGGGCGA AGATCCGAAC
GAGAGGATCA AGCGAGAGAT ATTGCACGAC ATCTTGGAGA CCCTATTCGA GCGCAAGAAG
CTTGCAGAAC AAATAAACTC GATAGCGGCC GTGAGAGACA TCATGCAAGA TGATGCCCTG
CGAAAATCTA AAGTAATGGA CCTTCTCGAA TTCGGAAGGG TGATACACGC TGAGATGTCT
GCGATAACTG ATGCTGCGCG CCTCGGCATC AAAATAAAAT CTGGAACGCT ATTCTGCACG
ACTTTTCCTT GTCATATTTG CGCGAAGCAC ATTGTGGCGT CTGGCATAGA CACCGTTGTA
TTCCTCGAGC CCTATCCGAA AAGCTATGCT CGTGAATTGC ACTCAGACTC CATCGAAATT
GAGGGTGATG AAGAGATAGC AAAGGTCAAA TTCACGCCTT TTCTTGGGAT TTCGCCTCTT
AGGTATCGTG ACTTTTTCGA GAAGGGGCGC CGAAAGGACA AGGAAACTGG AAAAATTATC
AGATGGACGG CCGGCATTGG CGTGCCCATT ATCGAGATTT ACTATGCTGT CTACATCAAC
TTGGAAACGT TAGTTTCAAA TGAATTGAAG CAAGACAAAC GGCTTCGGGA GAGGCCCGCA
CTATCTTGA
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| Protein sequence | MSVKRIAHPE LFFGLVAPVG VDLDMIMEVL STELTLQKYS AFPIHITEIM QDVPSNLVLK
NETYLDRINS RIEYADEICS RIEREDALAA IAITAIQSVR ERLNRELAER AAEKLPSDAR
LLQERLQLPI PKQAYLIRQF KRPKEIGLLR QVYGKLFFQI SAYSSPAERE LLLKKKIKAS
NFGGLEDSEA ECQAISLMAK DYQEADKPYG QQIRETFPLG DVFVDGVNRK NCEAMIKRFV
NLIFGDNSLT PDHHEYGMYL AKSAALRSGD LSRQVGAAIF RASGEVATLG CNEVPKYGGG
SYWSDGSEDR RDFALGEDPN ERIKREILHD ILETLFERKK LAEQINSIAA VRDIMQDDAL
RKSKVMDLLE FGRVIHAEMS AITDAARLGI KIKSGTLFCT TFPCHICAKH IVASGIDTVV
FLEPYPKSYA RELHSDSIEI EGDEEIAKVK FTPFLGISPL RYRDFFEKGR RKDKETGKII
RWTAGIGVPI IEIYYAVYIN LETLVSNELK QDKRLRERPA LS
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