| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1750 |
|---|
| Symbol | |
|---|
| ID | 3972247 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | + |
|---|
| Start bp | 1903495 |
|---|
| End bp | 1904121 |
|---|
| Gene Length | 627 bp |
|---|
| Protein Length | 208 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637924863 |
|---|
| Product | cytoplasmic chaperone TorD |
|---|
| Protein accession | YP_531628 |
|---|
| Protein GI | 90423258 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3381] Uncharacterized component of anaerobic dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.140783 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGACG TCTCGCATGC TGACCGAATA GCGGGACATG CACAGTGTTT GCTGTGGCTC
GCCGCGGTGT TCGCGGCGCC ACCCTCGCGC GACAGCGTCG CCTCCTATCG ACGCGGCGAA
GCCGCCGTCT GGCTGGGCGA ATTGGCTCGG CAACACGACC TCGCCGAAGG CGTCGCTCAA
ATCCGTGACG TGCTCGCCGC CGAACTCGAC GACGAGGCCT TGACGGCGCG ATTGGGCATT
GCGTTCGGAC GGCTGTTCAG CGGCATCGGC GGACCGGATG CGATCGCGCC TTACGAATCG
GCGTTCCGCT GCGGCGGGCG GCCGTTTCAA GCGCCGACCG CGGAAATGGA TGCGCTGCTG
GCGGCGCACG ATGTCTCGGT CGCCACCGGA CTGGCGGAGC CTGCCGACCA CGTTTCGGTG
GAGCTGTCGC TGCTTTCGCA ACTCATCGCC ACCGACGATC CGGGCCGCTT TGCATTGCAG
CAGCGGCTCT GCGGCTGGAT CCCGGATTTC TGTGCCGCCT GCCACGTGCG CGACCATCGT
GGATTCTGGG GCGGCGCGGC GATGCTGCTG ACCGCGCTGC TCACGCGCGA CACCAGCGCC
CCGACCACGG GTCGTTCGGC CGCGTAG
|
|---|
| Protein sequence | MSDVSHADRI AGHAQCLLWL AAVFAAPPSR DSVASYRRGE AAVWLGELAR QHDLAEGVAQ
IRDVLAAELD DEALTARLGI AFGRLFSGIG GPDAIAPYES AFRCGGRPFQ APTAEMDALL
AAHDVSVATG LAEPADHVSV ELSLLSQLIA TDDPGRFALQ QRLCGWIPDF CAACHVRDHR
GFWGGAAMLL TALLTRDTSA PTTGRSAA
|
|---|
| |