| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1749 |
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| Symbol | |
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| ID | 3972246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 1902345 |
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| End bp | 1903502 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637924862 |
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| Product | NapC/NirT cytochrome c-like |
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| Protein accession | YP_531627 |
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| Protein GI | 90423257 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3005] Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit |
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| TIGRFAM ID | [TIGR02162] trimethylamine-N-oxide reductase c-type cytochrome TorC |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.154925 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGATTCAAT TTCTGCGCAG CCGCGGTTCG AAATGGACCC TGGCCCTCGT TGCCGTGGCA
GGTGCTGTCG CGGGAGTGAT CGGTTGGGGC GGCTTCAACA CCGCGATGGA AGCCACCAAC
AGCCTCGAGT TCTGCATCTC GTGCCACGAG ATGCGCGACA CCGTCTTCAA GGAATATCAA
AAATCGATTC ACTACACCAA CGCCTCAGGC GTTCGTGCGG CCTGCCCGGA CTGCCATGTG
CCGAAGCAAT GGCTGCCGAA GTTCATCCGC AAGGTCGAGG CCAGCAGCGA AATCTACCAT
AAGTTGGTCG GCACCATCGA CACCCCGGAG AAGTTCGAGG CCGCGCGTCT TGGACTGGCC
AAGCGGGTGT GGGCGACGAT GAAGAACACC GACAGCCGCG AGTGCCGCAA TTGTCACTCG
TTCCAGACGA TGGATTTCCA CAAGCAGCGC CCGGCCGCCT CGGAGGCCAT GCAGAAGGGC
ATGGCCGACG GCAAGACCTG CATCGATTGT CACAAGGGCA TCGCCCACAA GATGCCCGAC
ATGAGCGTCG GCTATCGTTC GATCTTCAAC GAGCTGGCGG CATCGGCCAA GACGTTGCAG
CCCAAGGTCG GCGACACCCT CGCCACCTTG ATCACGACGT CGTTCTATCT GGACAAGCCC
GGCAAGGATG ATCCAGCCGA CGGCCGGCTG CTGGCGGCGA CCCCGATGAA GGTCACGGCA
GTGGACGGCC CCTTGCTGCA GGTGCAACTG ACCGGCTGGC AGCAGGAAGG CTCCGAGCAG
ATGCTCTATG CCCGACAGGG CAAGCGGATT CCCTCGGCCG CGCTCGGTCC CGAAGCGGTG
GAGAAGGTCA CCAGCGTCAG CACCATGACC GATCCCGACA CCGATCAGGT CTGGAGTGAA
GGCAAGCTCG CGGTCTGGGT GAAGAACGAA AACCTGGTCG CCGATGCGGC CAAGCTCAAC
GCCTACGGCG CCGAGATGTA CTCATCAAGC TGCGGGCTCT GCCACGCCTT GCCGGCGACC
GGGCACTTCC TCGCCAATCA GTGGATCGGC AATTTGAACG CGATGAAACG CTTCGTCACC
CTCGACGACG AGCAGTTCCG GATGGTTCAG AAGTACGTCC AGATGAACGC GCAGGACACC
GGAGGCAAGC ATGAGTGA
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| Protein sequence | MIQFLRSRGS KWTLALVAVA GAVAGVIGWG GFNTAMEATN SLEFCISCHE MRDTVFKEYQ
KSIHYTNASG VRAACPDCHV PKQWLPKFIR KVEASSEIYH KLVGTIDTPE KFEAARLGLA
KRVWATMKNT DSRECRNCHS FQTMDFHKQR PAASEAMQKG MADGKTCIDC HKGIAHKMPD
MSVGYRSIFN ELAASAKTLQ PKVGDTLATL ITTSFYLDKP GKDDPADGRL LAATPMKVTA
VDGPLLQVQL TGWQQEGSEQ MLYARQGKRI PSAALGPEAV EKVTSVSTMT DPDTDQVWSE
GKLAVWVKNE NLVADAAKLN AYGAEMYSSS CGLCHALPAT GHFLANQWIG NLNAMKRFVT
LDDEQFRMVQ KYVQMNAQDT GGKHE
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